Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Mir7684-201ENSMUST00000183858 60 ntBASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Smarcd3Q6P9Z1 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Rubie-203ENSMUST00000227803 2430 ntBASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Mir8102-201ENSMUST00000184148 139 ntBASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Smarcd3Q6P9Z1 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.91□□□□□ -0.5
Smarcd3Q6P9Z1 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms