Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slx4Q6P1D7 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slx4Q6P1D7 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Slx4Q6P1D7 Gm18626-201ENSMUST00000221512 1409 ntBASIC19.64■□□□□ 0.74
Slx4Q6P1D7 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slx4Q6P1D7 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Slx4Q6P1D7 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slx4Q6P1D7 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slx4Q6P1D7 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Slx4Q6P1D7 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slx4Q6P1D7 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slx4Q6P1D7 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Slx4Q6P1D7 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC19.64■□□□□ 0.73
Slx4Q6P1D7 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC19.64■□□□□ 0.73
Slx4Q6P1D7 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Slx4Q6P1D7 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC19.64■□□□□ 0.73
Slx4Q6P1D7 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC19.64■□□□□ 0.73
Slx4Q6P1D7 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Slx4Q6P1D7 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Slx4Q6P1D7 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC19.64■□□□□ 0.73
Slx4Q6P1D7 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC19.64■□□□□ 0.73
Slx4Q6P1D7 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Slx4Q6P1D7 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slx4Q6P1D7 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Slx4Q6P1D7 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slx4Q6P1D7 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slx4Q6P1D7 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Gm15703-201ENSMUST00000120250 880 ntBASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Gm16397-201ENSMUST00000122201 494 ntBASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Gm42682-201ENSMUST00000198349 1265 ntBASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Gm4607-201ENSMUST00000206649 577 ntBASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slx4Q6P1D7 AC123619.2-202ENSMUST00000225097 1568 ntBASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Slx4Q6P1D7 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slx4Q6P1D7 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slx4Q6P1D7 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC19.62■□□□□ 0.73
Slx4Q6P1D7 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC19.62■□□□□ 0.73
Slx4Q6P1D7 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Slx4Q6P1D7 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slx4Q6P1D7 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slx4Q6P1D7 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Slx4Q6P1D7 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slx4Q6P1D7 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slx4Q6P1D7 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC19.62■□□□□ 0.73
Slx4Q6P1D7 AC091458.1-201ENSMUST00000220902 1361 ntBASIC19.62■□□□□ 0.73
Slx4Q6P1D7 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slx4Q6P1D7 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slx4Q6P1D7 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slx4Q6P1D7 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slx4Q6P1D7 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slx4Q6P1D7 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slx4Q6P1D7 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Slx4Q6P1D7 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slx4Q6P1D7 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slx4Q6P1D7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slx4Q6P1D7 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slx4Q6P1D7 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Gm9996-201ENSMUST00000070359 913 ntBASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slx4Q6P1D7 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms