Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Mir686-201ENSMUST00000102174 109 ntBASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Gm6458-201ENSMUST00000211573 635 ntBASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sp140Q6NSQ5 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Gm13612-201ENSMUST00000119276 390 ntBASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Gm8515-201ENSMUST00000194852 576 ntBASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Gm6745-201ENSMUST00000199216 526 ntBASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.17□□□□□ -0.3
Sp140Q6NSQ5 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms