Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Gm42840-201ENSMUST00000200303 2251 ntBASIC9.41□□□□□ -0.9
Ndufa4Q62425 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufa4Q62425 Gm27177-202ENSMUST00000183514 2703 ntBASIC9.41□□□□□ -0.9
Ndufa4Q62425 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC9.41□□□□□ -0.9
Ndufa4Q62425 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC9.41□□□□□ -0.9
Ndufa4Q62425 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Ndufa4Q62425 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufa4Q62425 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufa4Q62425 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufa4Q62425 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufa4Q62425 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufa4Q62425 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC9.41□□□□□ -0.9
Ndufa4Q62425 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufa4Q62425 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufa4Q62425 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufa4Q62425 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC9.41□□□□□ -0.9
Ndufa4Q62425 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Ndufa4Q62425 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC9.41□□□□□ -0.9
Ndufa4Q62425 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ndufa4Q62425 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufa4Q62425 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufa4Q62425 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Shd-206ENSMUST00000225145 998 ntBASIC9.4□□□□□ -0.9
Ndufa4Q62425 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Gm38037-201ENSMUST00000192600 1624 ntBASIC9.4□□□□□ -0.9
Ndufa4Q62425 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ndufa4Q62425 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufa4Q62425 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufa4Q62425 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC9.4□□□□□ -0.91
Ndufa4Q62425 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Ndufa4Q62425 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufa4Q62425 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufa4Q62425 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
Ndufa4Q62425 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufa4Q62425 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufa4Q62425 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufa4Q62425 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufa4Q62425 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufa4Q62425 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufa4Q62425 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ndufa4Q62425 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufa4Q62425 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Ndufa4Q62425 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufa4Q62425 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC9.39□□□□□ -0.91
Ndufa4Q62425 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufa4Q62425 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufa4Q62425 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Ndufa4Q62425 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Ndufa4Q62425 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufa4Q62425 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufa4Q62425 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufa4Q62425 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufa4Q62425 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufa4Q62425 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC9.39□□□□□ -0.91
Ndufa4Q62425 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufa4Q62425 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufa4Q62425 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufa4Q62425 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufa4Q62425 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufa4Q62425 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC9.39□□□□□ -0.91
Ndufa4Q62425 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC9.39□□□□□ -0.91
Ndufa4Q62425 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC9.39□□□□□ -0.91
Ndufa4Q62425 Gm14730-201ENSMUST00000122378 1045 ntBASIC9.39□□□□□ -0.91
Ndufa4Q62425 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufa4Q62425 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ndufa4Q62425 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms