Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.99□□□□□ -0.49
AtmQ62388 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
AtmQ62388 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
AtmQ62388 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AtmQ62388 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
AtmQ62388 Gm13182-201ENSMUST00000122241 312 ntBASIC11.99□□□□□ -0.49
AtmQ62388 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
AtmQ62388 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.99□□□□□ -0.49
AtmQ62388 Gm8018-201ENSMUST00000173536 789 ntBASIC11.99□□□□□ -0.49
AtmQ62388 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
AtmQ62388 Mir6998-201ENSMUST00000183343 64 ntBASIC11.99□□□□□ -0.49
AtmQ62388 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
AtmQ62388 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
AtmQ62388 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.99□□□□□ -0.49
AtmQ62388 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.99□□□□□ -0.49
AtmQ62388 Gm2517-201ENSMUST00000215651 348 ntBASIC11.99□□□□□ -0.49
AtmQ62388 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AtmQ62388 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.99□□□□□ -0.49
AtmQ62388 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
AtmQ62388 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
AtmQ62388 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AtmQ62388 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
AtmQ62388 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
AtmQ62388 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.98□□□□□ -0.49
AtmQ62388 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.98□□□□□ -0.49
AtmQ62388 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.98□□□□□ -0.49
AtmQ62388 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.98□□□□□ -0.49
AtmQ62388 Gm11979-201ENSMUST00000119629 743 ntBASIC11.98□□□□□ -0.49
AtmQ62388 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC11.98□□□□□ -0.49
AtmQ62388 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.98□□□□□ -0.49
AtmQ62388 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 Gm10731-201ENSMUST00000181171 448 ntBASIC11.98□□□□□ -0.49
AtmQ62388 Gm44158-201ENSMUST00000203881 505 ntBASIC11.98□□□□□ -0.49
AtmQ62388 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.98□□□□□ -0.49
AtmQ62388 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
AtmQ62388 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
AtmQ62388 Gm15036-201ENSMUST00000118880 400 ntBASIC11.98□□□□□ -0.49
AtmQ62388 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
AtmQ62388 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
AtmQ62388 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.98□□□□□ -0.49
AtmQ62388 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.98□□□□□ -0.49
AtmQ62388 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.98□□□□□ -0.49
AtmQ62388 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.98□□□□□ -0.49
AtmQ62388 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC11.98□□□□□ -0.49
AtmQ62388 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
AtmQ62388 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
AtmQ62388 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
AtmQ62388 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
AtmQ62388 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AtmQ62388 Gm13492-201ENSMUST00000119772 665 ntBASIC11.97□□□□□ -0.49
AtmQ62388 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.97□□□□□ -0.49
AtmQ62388 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.97□□□□□ -0.49
AtmQ62388 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC11.97□□□□□ -0.49
AtmQ62388 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.97□□□□□ -0.49
AtmQ62388 Gm25201-201ENSMUST00000083093 170 ntBASIC11.97□□□□□ -0.49
AtmQ62388 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
AtmQ62388 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AtmQ62388 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
AtmQ62388 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AtmQ62388 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.97□□□□□ -0.49
AtmQ62388 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.97□□□□□ -0.49
AtmQ62388 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AtmQ62388 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AtmQ62388 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
AtmQ62388 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AtmQ62388 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AtmQ62388 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AtmQ62388 Gm14999-201ENSMUST00000121039 624 ntBASIC11.97□□□□□ -0.49
AtmQ62388 Gm23363-201ENSMUST00000175024 79 ntBASIC11.97□□□□□ -0.49
AtmQ62388 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AtmQ62388 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC11.97□□□□□ -0.49
AtmQ62388 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.97□□□□□ -0.49
AtmQ62388 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AtmQ62388 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.97□□□□□ -0.49
AtmQ62388 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms