Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.87□□□□□ -0.51
VcanQ62059 Gm37458-201ENSMUST00000194055 410 ntBASIC11.87□□□□□ -0.51
VcanQ62059 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC11.87□□□□□ -0.51
VcanQ62059 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.87□□□□□ -0.51
VcanQ62059 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
VcanQ62059 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VcanQ62059 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
VcanQ62059 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
VcanQ62059 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.86□□□□□ -0.51
VcanQ62059 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VcanQ62059 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.86□□□□□ -0.51
VcanQ62059 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VcanQ62059 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VcanQ62059 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.86□□□□□ -0.51
VcanQ62059 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.86□□□□□ -0.51
VcanQ62059 Gm8723-201ENSMUST00000166076 820 ntBASIC11.86□□□□□ -0.51
VcanQ62059 Gm8701-201ENSMUST00000169259 874 ntBASIC11.86□□□□□ -0.51
VcanQ62059 Gm3332-201ENSMUST00000189337 928 ntBASIC11.86□□□□□ -0.51
VcanQ62059 Gm5298-201ENSMUST00000201122 892 ntBASIC11.86□□□□□ -0.51
VcanQ62059 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VcanQ62059 Gm45310-201ENSMUST00000210436 275 ntBASIC11.86□□□□□ -0.51
VcanQ62059 Gm45594-201ENSMUST00000211717 241 ntBASIC11.86□□□□□ -0.51
VcanQ62059 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.86□□□□□ -0.51
VcanQ62059 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VcanQ62059 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
VcanQ62059 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VcanQ62059 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VcanQ62059 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VcanQ62059 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VcanQ62059 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VcanQ62059 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VcanQ62059 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VcanQ62059 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VcanQ62059 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VcanQ62059 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
VcanQ62059 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VcanQ62059 Gm13019-201ENSMUST00000120000 276 ntBASIC11.86□□□□□ -0.51
VcanQ62059 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.86□□□□□ -0.51
VcanQ62059 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
VcanQ62059 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.86□□□□□ -0.51
VcanQ62059 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.86□□□□□ -0.51
VcanQ62059 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
VcanQ62059 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
VcanQ62059 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
VcanQ62059 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
VcanQ62059 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VcanQ62059 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VcanQ62059 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VcanQ62059 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
VcanQ62059 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
VcanQ62059 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VcanQ62059 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
VcanQ62059 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
VcanQ62059 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
VcanQ62059 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.85□□□□□ -0.51
VcanQ62059 Gm11246-201ENSMUST00000120880 345 ntBASIC11.85□□□□□ -0.51
VcanQ62059 Gm23675-201ENSMUST00000157311 125 ntBASIC11.85□□□□□ -0.51
VcanQ62059 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.85□□□□□ -0.51
VcanQ62059 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC11.85□□□□□ -0.51
VcanQ62059 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 Gm25881-201ENSMUST00000157783 103 ntBASIC11.85□□□□□ -0.51
VcanQ62059 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.85□□□□□ -0.51
VcanQ62059 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.85□□□□□ -0.51
VcanQ62059 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
VcanQ62059 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
VcanQ62059 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
VcanQ62059 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.85□□□□□ -0.51
VcanQ62059 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.85□□□□□ -0.51
VcanQ62059 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.85□□□□□ -0.51
VcanQ62059 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
VcanQ62059 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
VcanQ62059 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 Gm9867-201ENSMUST00000192212 2647 ntBASIC11.85□□□□□ -0.51
VcanQ62059 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VcanQ62059 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms