Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ift88Q61371 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ift88Q61371 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.38□□□□□ -0.11
Ift88Q61371 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ift88Q61371 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.38□□□□□ -0.11
Ift88Q61371 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.38□□□□□ -0.11
Ift88Q61371 Gm7730-201ENSMUST00000212486 454 ntBASIC14.38□□□□□ -0.11
Ift88Q61371 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.38□□□□□ -0.11
Ift88Q61371 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ift88Q61371 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ift88Q61371 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ift88Q61371 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ift88Q61371 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ift88Q61371 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ift88Q61371 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ift88Q61371 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ift88Q61371 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ift88Q61371 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ift88Q61371 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ift88Q61371 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ift88Q61371 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ift88Q61371 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ift88Q61371 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ift88Q61371 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ift88Q61371 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ift88Q61371 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ift88Q61371 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
Ift88Q61371 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.37□□□□□ -0.11
Ift88Q61371 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ift88Q61371 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ift88Q61371 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ift88Q61371 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ift88Q61371 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ift88Q61371 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ift88Q61371 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ift88Q61371 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ift88Q61371 Gm13689-201ENSMUST00000119360 685 ntBASIC14.37□□□□□ -0.11
Ift88Q61371 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ift88Q61371 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.37□□□□□ -0.11
Ift88Q61371 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.37□□□□□ -0.11
Ift88Q61371 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Ift88Q61371 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.37□□□□□ -0.11
Ift88Q61371 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ift88Q61371 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ift88Q61371 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ift88Q61371 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ift88Q61371 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ift88Q61371 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.37□□□□□ -0.11
Ift88Q61371 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ift88Q61371 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ift88Q61371 Syt7-204ENSMUST00000223586 1344 ntBASIC14.37□□□□□ -0.11
Ift88Q61371 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.37□□□□□ -0.11
Ift88Q61371 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Ift88Q61371 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.37□□□□□ -0.11
Ift88Q61371 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ift88Q61371 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ift88Q61371 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Ift88Q61371 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ift88Q61371 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ift88Q61371 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ift88Q61371 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.36□□□□□ -0.11
Ift88Q61371 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ift88Q61371 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ift88Q61371 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ift88Q61371 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ift88Q61371 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ift88Q61371 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ift88Q61371 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ift88Q61371 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.36□□□□□ -0.11
Ift88Q61371 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.36□□□□□ -0.11
Ift88Q61371 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ift88Q61371 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Ift88Q61371 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Ift88Q61371 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ift88Q61371 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.36□□□□□ -0.11
Ift88Q61371 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.36□□□□□ -0.11
Ift88Q61371 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ift88Q61371 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ift88Q61371 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ift88Q61371 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.36□□□□□ -0.11
Ift88Q61371 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ift88Q61371 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ift88Q61371 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ift88Q61371 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ift88Q61371 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.36□□□□□ -0.11
Ift88Q61371 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ift88Q61371 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ift88Q61371 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.35□□□□□ -0.11
Ift88Q61371 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ift88Q61371 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ift88Q61371 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ift88Q61371 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ift88Q61371 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ift88Q61371 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ift88Q61371 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ift88Q61371 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ift88Q61371 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ift88Q61371 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ift88Q61371 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ift88Q61371 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms