Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six4Q61321 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Six4Q61321 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Six4Q61321 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six4Q61321 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.11□□□□□ -0.31
Six4Q61321 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Six4Q61321 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six4Q61321 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.1□□□□□ -0.31
Six4Q61321 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.1□□□□□ -0.31
Six4Q61321 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Six4Q61321 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six4Q61321 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six4Q61321 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six4Q61321 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.1□□□□□ -0.31
Six4Q61321 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Six4Q61321 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six4Q61321 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Six4Q61321 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Six4Q61321 Gm12291-201ENSMUST00000121627 311 ntBASIC13.1□□□□□ -0.31
Six4Q61321 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Six4Q61321 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Six4Q61321 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.1□□□□□ -0.31
Six4Q61321 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.1□□□□□ -0.31
Six4Q61321 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Six4Q61321 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.1□□□□□ -0.31
Six4Q61321 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.1□□□□□ -0.31
Six4Q61321 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Six4Q61321 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.1□□□□□ -0.31
Six4Q61321 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six4Q61321 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six4Q61321 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six4Q61321 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six4Q61321 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
Six4Q61321 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.1□□□□□ -0.31
Six4Q61321 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six4Q61321 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six4Q61321 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Six4Q61321 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six4Q61321 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Six4Q61321 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Six4Q61321 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six4Q61321 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Six4Q61321 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Six4Q61321 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six4Q61321 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Six4Q61321 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six4Q61321 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Six4Q61321 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six4Q61321 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Six4Q61321 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Six4Q61321 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Six4Q61321 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Six4Q61321 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Six4Q61321 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Six4Q61321 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.09□□□□□ -0.31
Six4Q61321 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Mir1982-201ENSMUST00000157368 74 ntBASIC13.09□□□□□ -0.31
Six4Q61321 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.09□□□□□ -0.31
Six4Q61321 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.09□□□□□ -0.31
Six4Q61321 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Six4Q61321 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Six4Q61321 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Six4Q61321 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.09□□□□□ -0.31
Six4Q61321 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Six4Q61321 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Six4Q61321 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.09□□□□□ -0.31
Six4Q61321 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Six4Q61321 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Six4Q61321 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
Six4Q61321 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Six4Q61321 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Six4Q61321 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Six4Q61321 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Six4Q61321 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms