Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.5□□□□□ -0.41
Col12a1Q60847 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Col12a1Q60847 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col12a1Q60847 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col12a1Q60847 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col12a1Q60847 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col12a1Q60847 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col12a1Q60847 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col12a1Q60847 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.5□□□□□ -0.41
Col12a1Q60847 Gm26013-201ENSMUST00000104404 119 ntBASIC12.5□□□□□ -0.41
Col12a1Q60847 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.5□□□□□ -0.41
Col12a1Q60847 Gm11956-201ENSMUST00000119525 512 ntBASIC12.5□□□□□ -0.41
Col12a1Q60847 Gm12783-201ENSMUST00000121425 397 ntBASIC12.5□□□□□ -0.41
Col12a1Q60847 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col12a1Q60847 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col12a1Q60847 Gm5100-201ENSMUST00000195631 589 ntBASIC12.5□□□□□ -0.41
Col12a1Q60847 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col12a1Q60847 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Col12a1Q60847 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col12a1Q60847 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.5□□□□□ -0.41
Col12a1Q60847 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col12a1Q60847 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col12a1Q60847 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col12a1Q60847 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col12a1Q60847 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col12a1Q60847 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col12a1Q60847 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Col12a1Q60847 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.49□□□□□ -0.41
Col12a1Q60847 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Col12a1Q60847 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12.49□□□□□ -0.41
Col12a1Q60847 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Col12a1Q60847 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.49□□□□□ -0.41
Col12a1Q60847 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.49□□□□□ -0.41
Col12a1Q60847 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 Gm22133-201ENSMUST00000102082 109 ntBASIC12.49□□□□□ -0.41
Col12a1Q60847 Gm23596-201ENSMUST00000104304 132 ntBASIC12.49□□□□□ -0.41
Col12a1Q60847 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.49□□□□□ -0.41
Col12a1Q60847 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.49□□□□□ -0.41
Col12a1Q60847 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.49□□□□□ -0.41
Col12a1Q60847 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.49□□□□□ -0.41
Col12a1Q60847 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Col12a1Q60847 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col12a1Q60847 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Gm11989-201ENSMUST00000117240 672 ntBASIC12.48□□□□□ -0.41
Col12a1Q60847 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Col12a1Q60847 Gm11362-201ENSMUST00000118838 850 ntBASIC12.48□□□□□ -0.41
Col12a1Q60847 Gm11246-201ENSMUST00000120880 345 ntBASIC12.48□□□□□ -0.41
Col12a1Q60847 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.48□□□□□ -0.41
Col12a1Q60847 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.48□□□□□ -0.41
Col12a1Q60847 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.48□□□□□ -0.41
Col12a1Q60847 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Col12a1Q60847 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Col12a1Q60847 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Col12a1Q60847 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Col12a1Q60847 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Col12a1Q60847 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.48□□□□□ -0.41
Col12a1Q60847 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC12.48□□□□□ -0.41
Col12a1Q60847 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.48□□□□□ -0.41
Col12a1Q60847 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.48□□□□□ -0.41
Col12a1Q60847 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col12a1Q60847 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms