Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shroom1Q5SX79 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.83□□□□□ -0.19
Shroom1Q5SX79 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Shroom1Q5SX79 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Shroom1Q5SX79 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.83□□□□□ -0.19
Shroom1Q5SX79 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Shroom1Q5SX79 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Gm11978-201ENSMUST00000122315 466 ntBASIC13.83□□□□□ -0.2
Shroom1Q5SX79 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Gm38158-201ENSMUST00000194617 339 ntBASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Gm38341-201ENSMUST00000195357 515 ntBASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Gm19163-201ENSMUST00000223313 780 ntBASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Shroom1Q5SX79 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Gm7046-201ENSMUST00000221351 977 ntBASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Gm8227-201ENSMUST00000223306 571 ntBASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shroom1Q5SX79 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Gm6023-201ENSMUST00000118217 606 ntBASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Gm7809-201ENSMUST00000153199 742 ntBASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Gm26185-201ENSMUST00000157692 266 ntBASIC13.81□□□□□ -0.2
Shroom1Q5SX79 Gm24548-201ENSMUST00000158650 108 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms