Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gm12070-201ENSMUST00000119551 1002 ntBASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm12671-201ENSMUST00000119978 1002 ntBASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm13292-201ENSMUST00000120014 1000 ntBASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm12403-201ENSMUST00000121384 959 ntBASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm10359-201ENSMUST00000180167 1002 ntBASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm12033-201ENSMUST00000180654 1002 ntBASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm5559-201ENSMUST00000180755 1002 ntBASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm4335-201ENSMUST00000182581 1004 ntBASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm14730-201ENSMUST00000122378 1045 ntBASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm3436-201ENSMUST00000179930 840 ntBASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm27533-201ENSMUST00000183800 152 ntBASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm38144-201ENSMUST00000192790 465 ntBASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm10253-201ENSMUST00000194270 940 ntBASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm7498-201ENSMUST00000203282 1084 ntBASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm24447-201ENSMUST00000083977 338 ntBASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms