Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm2445-201ENSMUST00000182798 989 ntBASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 AC154222.1-201ENSMUST00000223882 475 ntBASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 AC159295.1-201ENSMUST00000225326 940 ntBASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Gm38055-201ENSMUST00000195353 2217 ntBASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Gm42498-201ENSMUST00000199981 1372 ntBASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Trav3-3Q5R1C3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Gm13597-201ENSMUST00000121239 375 ntBASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Gm44608-201ENSMUST00000206827 855 ntBASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Psmb5-202ENSMUST00000227257 622 ntBASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Gm44758-201ENSMUST00000206096 2068 ntBASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav3-3Q5R1C3 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 CT009713.5-203ENSMUST00000224218 2079 ntBASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Gm12882-201ENSMUST00000121696 517 ntBASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Gm43332-201ENSMUST00000202511 1044 ntBASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 AC093022.5-201ENSMUST00000226841 1079 ntBASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC9.73□□□□□ -0.85
Trav3-3Q5R1C3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms