Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Syne3Q4FZC9 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Mir7221-201ENSMUST00000184009 72 ntBASIC13.81□□□□□ -0.2
Syne3Q4FZC9 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Syne3Q4FZC9 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Gm16372-201ENSMUST00000073088 450 ntBASIC13.8□□□□□ -0.2
Syne3Q4FZC9 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Syne3Q4FZC9 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Syne3Q4FZC9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms