Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Cks1brtQ3UNC9 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Cks1brtQ3UNC9 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Cks1brtQ3UNC9 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Cks1brtQ3UNC9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Cks1brtQ3UNC9 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Cks1brtQ3UNC9 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Cks1brtQ3UNC9 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Cks1brtQ3UNC9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Cks1brtQ3UNC9 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Cks1brtQ3UNC9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Cks1brtQ3UNC9 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Cks1brtQ3UNC9 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Cks1brtQ3UNC9 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Cks1brtQ3UNC9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC9.3□□□□□ -0.92
Cks1brtQ3UNC9 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Cks1brtQ3UNC9 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 AC114543.1-201ENSMUST00000226451 1558 ntBASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 AC139350.1-201ENSMUST00000227064 1594 ntBASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 AC124577.2-201ENSMUST00000217413 2420 ntBASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Gm25990-201ENSMUST00000102440 86 ntBASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Gm15173-201ENSMUST00000122049 433 ntBASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Cks1brtQ3UNC9 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cks1brtQ3UNC9 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cks1brtQ3UNC9 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cks1brtQ3UNC9 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cks1brtQ3UNC9 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cks1brtQ3UNC9 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cks1brtQ3UNC9 Gm42943-201ENSMUST00000199676 3242 ntBASIC9.28□□□□□ -0.92
Cks1brtQ3UNC9 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC9.28□□□□□ -0.92
Cks1brtQ3UNC9 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cks1brtQ3UNC9 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cks1brtQ3UNC9 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cks1brtQ3UNC9 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cks1brtQ3UNC9 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cks1brtQ3UNC9 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Cks1brtQ3UNC9 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Cks1brtQ3UNC9 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC9.28□□□□□ -0.92
Cks1brtQ3UNC9 AC122860.2-201ENSMUST00000217967 2671 ntBASIC9.28□□□□□ -0.92
Cks1brtQ3UNC9 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Cks1brtQ3UNC9 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC9.28□□□□□ -0.92
Cks1brtQ3UNC9 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms