Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.65□□□□□ -0.22
Upf3aQ3ULJ3 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Gm14028-201ENSMUST00000117434 479 ntBASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Gm14109-201ENSMUST00000118814 309 ntBASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Gm12291-201ENSMUST00000121627 311 ntBASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Gm27046-201ENSMUST00000182160 463 ntBASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Gm3096-201ENSMUST00000185770 364 ntBASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Nsd1-205ENSMUST00000224693 852 ntBASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.64□□□□□ -0.23
Upf3aQ3ULJ3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Upf3aQ3ULJ3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Upf3aQ3ULJ3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms