Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Gm42518-201ENSMUST00000196277 938 ntBASIC15.97■□□□□ 0.15
Vars2Q3U2A8 Gm19994-201ENSMUST00000217086 586 ntBASIC15.97■□□□□ 0.15
Vars2Q3U2A8 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.97■□□□□ 0.15
Vars2Q3U2A8 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vars2Q3U2A8 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Vars2Q3U2A8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vars2Q3U2A8 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.97■□□□□ 0.15
Vars2Q3U2A8 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vars2Q3U2A8 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vars2Q3U2A8 AC130671.2-201ENSMUST00000227224 1621 ntBASIC15.97■□□□□ 0.15
Vars2Q3U2A8 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Vars2Q3U2A8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.97■□□□□ 0.15
Vars2Q3U2A8 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vars2Q3U2A8 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vars2Q3U2A8 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vars2Q3U2A8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vars2Q3U2A8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vars2Q3U2A8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vars2Q3U2A8 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Vars2Q3U2A8 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vars2Q3U2A8 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vars2Q3U2A8 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vars2Q3U2A8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vars2Q3U2A8 Gm11989-201ENSMUST00000117240 672 ntBASIC15.96■□□□□ 0.15
Vars2Q3U2A8 Gm11362-201ENSMUST00000118838 850 ntBASIC15.96■□□□□ 0.15
Vars2Q3U2A8 Gm12516-201ENSMUST00000120819 385 ntBASIC15.96■□□□□ 0.15
Vars2Q3U2A8 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
Vars2Q3U2A8 Gm20392-201ENSMUST00000173047 701 ntBASIC15.96■□□□□ 0.15
Vars2Q3U2A8 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vars2Q3U2A8 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vars2Q3U2A8 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC15.96■□□□□ 0.15
Vars2Q3U2A8 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC15.96■□□□□ 0.15
Vars2Q3U2A8 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC15.96■□□□□ 0.15
Vars2Q3U2A8 Gm9996-201ENSMUST00000070359 913 ntBASIC15.96■□□□□ 0.15
Vars2Q3U2A8 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vars2Q3U2A8 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Vars2Q3U2A8 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vars2Q3U2A8 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.96■□□□□ 0.15
Vars2Q3U2A8 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vars2Q3U2A8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Vars2Q3U2A8 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vars2Q3U2A8 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vars2Q3U2A8 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vars2Q3U2A8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vars2Q3U2A8 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Vars2Q3U2A8 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Vars2Q3U2A8 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Vars2Q3U2A8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Vars2Q3U2A8 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Gm3765-201ENSMUST00000130985 1447 ntBASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC15.95■□□□□ 0.14
Vars2Q3U2A8 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Gm7395-201ENSMUST00000216059 1045 ntBASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Vars2Q3U2A8 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vars2Q3U2A8 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vars2Q3U2A8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vars2Q3U2A8 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vars2Q3U2A8 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Vars2Q3U2A8 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Vars2Q3U2A8 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Vars2Q3U2A8 Gm11801-201ENSMUST00000117807 746 ntBASIC15.94■□□□□ 0.14
Vars2Q3U2A8 Gm13809-201ENSMUST00000117921 597 ntBASIC15.94■□□□□ 0.14
Vars2Q3U2A8 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC15.94■□□□□ 0.14
Vars2Q3U2A8 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC15.94■□□□□ 0.14
Vars2Q3U2A8 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC15.94■□□□□ 0.14
Vars2Q3U2A8 Gm4726-201ENSMUST00000135604 736 ntBASIC15.94■□□□□ 0.14
Vars2Q3U2A8 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC15.94■□□□□ 0.14
Vars2Q3U2A8 Gm6019-201ENSMUST00000148369 736 ntBASIC15.94■□□□□ 0.14
Vars2Q3U2A8 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vars2Q3U2A8 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Vars2Q3U2A8 Gm23771-201ENSMUST00000178702 110 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms