Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.43
Khdc4Q3TCX3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Khdc4Q3TCX3 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Gm4271-201ENSMUST00000174444 973 ntBASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Gm37008-201ENSMUST00000195712 319 ntBASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Khdc4Q3TCX3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Gm27682-201ENSMUST00000183930 110 ntBASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Khdc4Q3TCX3 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms