Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.65□□□□□ -0.22
Cul4aQ3TCH7 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.65□□□□□ -0.23
Cul4aQ3TCH7 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Cul4aQ3TCH7 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cul4aQ3TCH7 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Gm15920-201ENSMUST00000118998 402 ntBASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Gm28631-201ENSMUST00000190740 334 ntBASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Gm18307-201ENSMUST00000206864 949 ntBASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Gm6218-201ENSMUST00000219812 628 ntBASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cul4aQ3TCH7 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Gm13813-201ENSMUST00000120998 787 ntBASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Gm16215-201ENSMUST00000161990 637 ntBASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cul4aQ3TCH7 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cul4aQ3TCH7 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms