Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q3KNL4 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q3KNL4 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Q3KNL4 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.78□□□□□ -0.36
Q3KNL4 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q3KNL4 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q3KNL4 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Q3KNL4 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q3KNL4 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Q3KNL4 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.78□□□□□ -0.36
Q3KNL4 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q3KNL4 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q3KNL4 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Q3KNL4 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Q3KNL4 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Q3KNL4 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Q3KNL4 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Q3KNL4 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Q3KNL4 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Q3KNL4 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Q3KNL4 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Q3KNL4 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q3KNL4 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q3KNL4 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Q3KNL4 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.77□□□□□ -0.37
Q3KNL4 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.77□□□□□ -0.37
Q3KNL4 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.77□□□□□ -0.37
Q3KNL4 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q3KNL4 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.77□□□□□ -0.37
Q3KNL4 Gm7730-201ENSMUST00000212486 454 ntBASIC12.77□□□□□ -0.37
Q3KNL4 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q3KNL4 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Q3KNL4 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q3KNL4 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.77□□□□□ -0.37
Q3KNL4 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q3KNL4 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q3KNL4 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q3KNL4 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q3KNL4 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q3KNL4 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q3KNL4 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Q3KNL4 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Q3KNL4 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.77□□□□□ -0.37
Q3KNL4 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Q3KNL4 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.77□□□□□ -0.37
Q3KNL4 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q3KNL4 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q3KNL4 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q3KNL4 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q3KNL4 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q3KNL4 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Q3KNL4 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Q3KNL4 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Q3KNL4 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.76□□□□□ -0.37
Q3KNL4 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Q3KNL4 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.76□□□□□ -0.37
Q3KNL4 Gm16215-201ENSMUST00000161990 637 ntBASIC12.76□□□□□ -0.37
Q3KNL4 Gm42612-201ENSMUST00000197986 623 ntBASIC12.76□□□□□ -0.37
Q3KNL4 Gm43170-201ENSMUST00000199827 612 ntBASIC12.76□□□□□ -0.37
Q3KNL4 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.76□□□□□ -0.37
Q3KNL4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Q3KNL4 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Gm19220-201ENSMUST00000222682 803 ntBASIC12.76□□□□□ -0.37
Q3KNL4 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Q3KNL4 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Q3KNL4 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.76□□□□□ -0.37
Q3KNL4 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.76□□□□□ -0.37
Q3KNL4 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.76□□□□□ -0.37
Q3KNL4 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Q3KNL4 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms