Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm8436-201ENSMUST00000210152 1080 ntBASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm5749-201ENSMUST00000210673 1090 ntBASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm7701-201ENSMUST00000163185 1479 ntBASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm11996-201ENSMUST00000117538 915 ntBASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm12129-201ENSMUST00000120104 1147 ntBASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm9061-201ENSMUST00000182707 1006 ntBASIC6.66□□□□□ -1.34
Ush2AQ2QI47 AC154252.2-201ENSMUST00000223593 767 ntBASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm15196-201ENSMUST00000121406 482 ntBASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm26313-201ENSMUST00000157770 308 ntBASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm18294-201ENSMUST00000176980 1748 ntBASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm13505-201ENSMUST00000121666 817 ntBASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm6652-201ENSMUST00000186414 1070 ntBASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm43852-201ENSMUST00000202098 917 ntBASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm42689-201ENSMUST00000202403 404 ntBASIC6.66□□□□□ -1.34
Ush2AQ2QI47 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Ush2AQ2QI47 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Gm7939-201ENSMUST00000201233 1050 ntBASIC6.65□□□□□ -1.34
Ush2AQ2QI47 BC080696-201ENSMUST00000202858 1218 ntBASIC6.65□□□□□ -1.34
Ush2AQ2QI47 AC152169.1-201ENSMUST00000223901 701 ntBASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Gm43267-201ENSMUST00000199664 1796 ntBASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC6.65□□□□□ -1.34
Ush2AQ2QI47 Gm38228-201ENSMUST00000193169 1293 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms