Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Gm5700-201ENSMUST00000191483 989 ntBASIC11.53□□□□□ -0.56
Chd8Q09XV5 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.53□□□□□ -0.56
Chd8Q09XV5 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.53□□□□□ -0.56
Chd8Q09XV5 Gm807-202ENSMUST00000224929 408 ntBASIC11.53□□□□□ -0.56
Chd8Q09XV5 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Gm14993-201ENSMUST00000121180 164 ntBASIC11.53□□□□□ -0.56
Chd8Q09XV5 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC11.53□□□□□ -0.56
Chd8Q09XV5 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chd8Q09XV5 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chd8Q09XV5 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chd8Q09XV5 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Chd8Q09XV5 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Chd8Q09XV5 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chd8Q09XV5 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.52□□□□□ -0.56
Chd8Q09XV5 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Chd8Q09XV5 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Chd8Q09XV5 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chd8Q09XV5 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.52□□□□□ -0.56
Chd8Q09XV5 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chd8Q09XV5 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chd8Q09XV5 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC11.52□□□□□ -0.56
Chd8Q09XV5 Gm22846-201ENSMUST00000157706 270 ntBASIC11.52□□□□□ -0.56
Chd8Q09XV5 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chd8Q09XV5 Gm24954-201ENSMUST00000178831 110 ntBASIC11.52□□□□□ -0.56
Chd8Q09XV5 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Chd8Q09XV5 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Chd8Q09XV5 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.52□□□□□ -0.56
Chd8Q09XV5 Mir326-201ENSMUST00000083637 95 ntBASIC11.52□□□□□ -0.56
Chd8Q09XV5 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Chd8Q09XV5 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chd8Q09XV5 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Chd8Q09XV5 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Gm12345-201ENSMUST00000119288 898 ntBASIC11.52□□□□□ -0.57
Chd8Q09XV5 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Gm23363-201ENSMUST00000175024 79 ntBASIC11.52□□□□□ -0.57
Chd8Q09XV5 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.52□□□□□ -0.57
Chd8Q09XV5 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chd8Q09XV5 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chd8Q09XV5 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms