Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf1Q07802 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf1Q07802 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ebf1Q07802 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf1Q07802 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.2□□□□□ -0.3
Ebf1Q07802 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf1Q07802 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf1Q07802 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf1Q07802 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.2□□□□□ -0.3
Ebf1Q07802 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.2□□□□□ -0.3
Ebf1Q07802 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.2□□□□□ -0.3
Ebf1Q07802 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf1Q07802 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ebf1Q07802 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.19□□□□□ -0.3
Ebf1Q07802 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ebf1Q07802 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.19□□□□□ -0.3
Ebf1Q07802 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.19□□□□□ -0.3
Ebf1Q07802 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.19□□□□□ -0.3
Ebf1Q07802 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.19□□□□□ -0.3
Ebf1Q07802 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.19□□□□□ -0.3
Ebf1Q07802 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.19□□□□□ -0.3
Ebf1Q07802 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.19□□□□□ -0.3
Ebf1Q07802 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.19□□□□□ -0.3
Ebf1Q07802 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ebf1Q07802 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ebf1Q07802 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.18□□□□□ -0.3
Ebf1Q07802 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.18□□□□□ -0.3
Ebf1Q07802 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Gm7809-201ENSMUST00000153199 742 ntBASIC13.18□□□□□ -0.3
Ebf1Q07802 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Gm37444-201ENSMUST00000193605 439 ntBASIC13.18□□□□□ -0.3
Ebf1Q07802 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.18□□□□□ -0.3
Ebf1Q07802 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.18□□□□□ -0.3
Ebf1Q07802 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.18□□□□□ -0.3
Ebf1Q07802 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.18□□□□□ -0.3
Ebf1Q07802 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.18□□□□□ -0.3
Ebf1Q07802 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ebf1Q07802 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.18□□□□□ -0.3
Ebf1Q07802 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.18□□□□□ -0.3
Ebf1Q07802 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Ebf1Q07802 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ebf1Q07802 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Ebf1Q07802 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ebf1Q07802 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf1Q07802 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf1Q07802 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ebf1Q07802 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf1Q07802 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf1Q07802 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ebf1Q07802 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms