Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.43□□□□□ -0.58
Thbs3Q05895 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Thbs3Q05895 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Thbs3Q05895 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.42□□□□□ -0.58
Thbs3Q05895 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC11.42□□□□□ -0.58
Thbs3Q05895 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.42□□□□□ -0.58
Thbs3Q05895 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Thbs3Q05895 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Thbs3Q05895 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Thbs3Q05895 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.42□□□□□ -0.58
Thbs3Q05895 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Gm2231-201ENSMUST00000125661 612 ntBASIC11.42□□□□□ -0.58
Thbs3Q05895 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.42□□□□□ -0.58
Thbs3Q05895 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.42□□□□□ -0.58
Thbs3Q05895 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.42□□□□□ -0.58
Thbs3Q05895 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Thbs3Q05895 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.42□□□□□ -0.58
Thbs3Q05895 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.42□□□□□ -0.58
Thbs3Q05895 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.42□□□□□ -0.58
Thbs3Q05895 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.42□□□□□ -0.58
Thbs3Q05895 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thbs3Q05895 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs3Q05895 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Thbs3Q05895 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs3Q05895 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs3Q05895 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs3Q05895 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs3Q05895 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs3Q05895 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.41□□□□□ -0.58
Thbs3Q05895 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs3Q05895 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.41□□□□□ -0.58
Thbs3Q05895 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs3Q05895 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs3Q05895 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs3Q05895 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs3Q05895 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs3Q05895 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs3Q05895 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Thbs3Q05895 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.41□□□□□ -0.58
Thbs3Q05895 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs3Q05895 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs3Q05895 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs3Q05895 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs3Q05895 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.41□□□□□ -0.58
Thbs3Q05895 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs3Q05895 Gm4984-201ENSMUST00000115987 360 ntBASIC11.41□□□□□ -0.58
Thbs3Q05895 Gm8805-201ENSMUST00000117848 313 ntBASIC11.41□□□□□ -0.58
Thbs3Q05895 Gm13369-201ENSMUST00000119442 987 ntBASIC11.41□□□□□ -0.58
Thbs3Q05895 Gm11637-201ENSMUST00000120601 592 ntBASIC11.41□□□□□ -0.58
Thbs3Q05895 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.41□□□□□ -0.58
Thbs3Q05895 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs3Q05895 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.41□□□□□ -0.58
Thbs3Q05895 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs3Q05895 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.41□□□□□ -0.58
Thbs3Q05895 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.41□□□□□ -0.58
Thbs3Q05895 Gm29649-201ENSMUST00000185649 419 ntBASIC11.41□□□□□ -0.58
Thbs3Q05895 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.41□□□□□ -0.58
Thbs3Q05895 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.41□□□□□ -0.58
Thbs3Q05895 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
Thbs3Q05895 Gm7561-201ENSMUST00000211203 886 ntBASIC11.41□□□□□ -0.58
Thbs3Q05895 Gm29705-201ENSMUST00000212598 474 ntBASIC11.41□□□□□ -0.58
Thbs3Q05895 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.41□□□□□ -0.58
Thbs3Q05895 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.41□□□□□ -0.58
Thbs3Q05895 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs3Q05895 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Thbs3Q05895 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Thbs3Q05895 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs3Q05895 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs3Q05895 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Thbs3Q05895 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms