Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.21□□□□□ -0.3
Gabpb1Q00420 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.21□□□□□ -0.3
Gabpb1Q00420 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gabpb1Q00420 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.21□□□□□ -0.3
Gabpb1Q00420 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.21□□□□□ -0.3
Gabpb1Q00420 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gabpb1Q00420 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Gabpb1Q00420 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gabpb1Q00420 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Gabpb1Q00420 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabpb1Q00420 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabpb1Q00420 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabpb1Q00420 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gabpb1Q00420 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabpb1Q00420 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Gabpb1Q00420 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Gabpb1Q00420 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabpb1Q00420 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gabpb1Q00420 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabpb1Q00420 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gabpb1Q00420 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.2□□□□□ -0.3
Gabpb1Q00420 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.2□□□□□ -0.3
Gabpb1Q00420 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.2□□□□□ -0.3
Gabpb1Q00420 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.2□□□□□ -0.3
Gabpb1Q00420 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.2□□□□□ -0.3
Gabpb1Q00420 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gabpb1Q00420 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabpb1Q00420 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gabpb1Q00420 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Gabpb1Q00420 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabpb1Q00420 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Gabpb1Q00420 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Gabpb1Q00420 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabpb1Q00420 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabpb1Q00420 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabpb1Q00420 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Gabpb1Q00420 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gabpb1Q00420 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gabpb1Q00420 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabpb1Q00420 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.19□□□□□ -0.3
Gabpb1Q00420 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Gm10156-201ENSMUST00000122364 462 ntBASIC13.19□□□□□ -0.3
Gabpb1Q00420 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.19□□□□□ -0.3
Gabpb1Q00420 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.19□□□□□ -0.3
Gabpb1Q00420 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.19□□□□□ -0.3
Gabpb1Q00420 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.19□□□□□ -0.3
Gabpb1Q00420 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabpb1Q00420 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.19□□□□□ -0.3
Gabpb1Q00420 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gabpb1Q00420 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.18□□□□□ -0.3
Gabpb1Q00420 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Gabpb1Q00420 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.18□□□□□ -0.3
Gabpb1Q00420 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.18□□□□□ -0.3
Gabpb1Q00420 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Gm8598-201ENSMUST00000221184 836 ntBASIC13.18□□□□□ -0.3
Gabpb1Q00420 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.18□□□□□ -0.3
Gabpb1Q00420 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gabpb1Q00420 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms