Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.13□□□□□ -0.15
Trim43cP86449 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trim43cP86449 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim43cP86449 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.13□□□□□ -0.15
Trim43cP86449 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trim43cP86449 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.13□□□□□ -0.15
Trim43cP86449 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim43cP86449 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim43cP86449 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim43cP86449 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Trim43cP86449 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim43cP86449 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim43cP86449 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim43cP86449 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Trim43cP86449 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43cP86449 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim43cP86449 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43cP86449 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.12□□□□□ -0.15
Trim43cP86449 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43cP86449 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43cP86449 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim43cP86449 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43cP86449 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43cP86449 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim43cP86449 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim43cP86449 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43cP86449 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43cP86449 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.12□□□□□ -0.15
Trim43cP86449 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43cP86449 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.12□□□□□ -0.15
Trim43cP86449 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.12□□□□□ -0.15
Trim43cP86449 Gm13813-201ENSMUST00000120998 787 ntBASIC14.12□□□□□ -0.15
Trim43cP86449 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.12□□□□□ -0.15
Trim43cP86449 Gm2231-201ENSMUST00000125661 612 ntBASIC14.12□□□□□ -0.15
Trim43cP86449 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim43cP86449 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43cP86449 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.12□□□□□ -0.15
Trim43cP86449 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.12□□□□□ -0.15
Trim43cP86449 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.12□□□□□ -0.15
Trim43cP86449 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43cP86449 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43cP86449 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Trim43cP86449 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43cP86449 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43cP86449 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43cP86449 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Trim43cP86449 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43cP86449 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43cP86449 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43cP86449 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Trim43cP86449 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43cP86449 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43cP86449 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43cP86449 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.12□□□□□ -0.15
Trim43cP86449 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43cP86449 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim43cP86449 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43cP86449 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43cP86449 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trim43cP86449 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.11□□□□□ -0.15
Trim43cP86449 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43cP86449 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43cP86449 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43cP86449 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43cP86449 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.11□□□□□ -0.15
Trim43cP86449 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43cP86449 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43cP86449 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43cP86449 Gm12363-201ENSMUST00000122250 668 ntBASIC14.11□□□□□ -0.15
Trim43cP86449 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.11□□□□□ -0.15
Trim43cP86449 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43cP86449 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.11□□□□□ -0.15
Trim43cP86449 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43cP86449 Gm26927-201ENSMUST00000182385 965 ntBASIC14.11□□□□□ -0.15
Trim43cP86449 Gm29649-201ENSMUST00000185649 419 ntBASIC14.11□□□□□ -0.15
Trim43cP86449 Gm37042-201ENSMUST00000193816 581 ntBASIC14.11□□□□□ -0.15
Trim43cP86449 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.11□□□□□ -0.15
Trim43cP86449 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim43cP86449 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43cP86449 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43cP86449 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43cP86449 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trim43cP86449 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms