Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.83□□□□□ -0.36
Shox2P70390 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Shox2P70390 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Shox2P70390 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shox2P70390 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Shox2P70390 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shox2P70390 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.82□□□□□ -0.36
Shox2P70390 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shox2P70390 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shox2P70390 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.82□□□□□ -0.36
Shox2P70390 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shox2P70390 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shox2P70390 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.82□□□□□ -0.36
Shox2P70390 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Shox2P70390 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shox2P70390 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Shox2P70390 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Shox2P70390 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.82□□□□□ -0.36
Shox2P70390 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shox2P70390 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shox2P70390 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.82□□□□□ -0.36
Shox2P70390 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.82□□□□□ -0.36
Shox2P70390 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Shox2P70390 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.82□□□□□ -0.36
Shox2P70390 Gm10576-201ENSMUST00000191927 825 ntBASIC12.82□□□□□ -0.36
Shox2P70390 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.82□□□□□ -0.36
Shox2P70390 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shox2P70390 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Shox2P70390 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.82□□□□□ -0.36
Shox2P70390 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.82□□□□□ -0.36
Shox2P70390 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shox2P70390 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shox2P70390 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shox2P70390 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shox2P70390 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shox2P70390 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shox2P70390 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shox2P70390 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.82□□□□□ -0.36
Shox2P70390 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.82□□□□□ -0.36
Shox2P70390 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Shox2P70390 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Shox2P70390 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.82□□□□□ -0.36
Shox2P70390 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shox2P70390 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.82□□□□□ -0.36
Shox2P70390 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Shox2P70390 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shox2P70390 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shox2P70390 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shox2P70390 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shox2P70390 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shox2P70390 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shox2P70390 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shox2P70390 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shox2P70390 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shox2P70390 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shox2P70390 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shox2P70390 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Shox2P70390 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.81□□□□□ -0.36
Shox2P70390 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.81□□□□□ -0.36
Shox2P70390 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.81□□□□□ -0.36
Shox2P70390 Mir8098-201ENSMUST00000184011 137 ntBASIC12.81□□□□□ -0.36
Shox2P70390 Gm27772-201ENSMUST00000184900 187 ntBASIC12.81□□□□□ -0.36
Shox2P70390 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.81□□□□□ -0.36
Shox2P70390 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shox2P70390 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shox2P70390 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shox2P70390 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Shox2P70390 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shox2P70390 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Shox2P70390 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shox2P70390 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Shox2P70390 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.81□□□□□ -0.36
Shox2P70390 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shox2P70390 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shox2P70390 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shox2P70390 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shox2P70390 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shox2P70390 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.81□□□□□ -0.36
Shox2P70390 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Shox2P70390 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Shox2P70390 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.8□□□□□ -0.36
Shox2P70390 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.8□□□□□ -0.36
Shox2P70390 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Shox2P70390 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Shox2P70390 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.8□□□□□ -0.36
Shox2P70390 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shox2P70390 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.8□□□□□ -0.36
Shox2P70390 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Shox2P70390 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Shox2P70390 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms