Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdlim4P70271 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Pdlim4P70271 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdlim4P70271 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.85□□□□□ -0.67
Pdlim4P70271 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Pdlim4P70271 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.85□□□□□ -0.67
Pdlim4P70271 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.85□□□□□ -0.67
Pdlim4P70271 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.85□□□□□ -0.67
Pdlim4P70271 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.85□□□□□ -0.67
Pdlim4P70271 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.85□□□□□ -0.67
Pdlim4P70271 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Pdlim4P70271 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 Gm5303-201ENSMUST00000117943 1252 ntBASIC10.85□□□□□ -0.67
Pdlim4P70271 Gm13612-201ENSMUST00000119276 390 ntBASIC10.85□□□□□ -0.67
Pdlim4P70271 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Pdlim4P70271 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.85□□□□□ -0.67
Pdlim4P70271 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.85□□□□□ -0.67
Pdlim4P70271 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.85□□□□□ -0.67
Pdlim4P70271 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pdlim4P70271 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.85□□□□□ -0.67
Pdlim4P70271 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pdlim4P70271 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.84□□□□□ -0.67
Pdlim4P70271 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.84□□□□□ -0.67
Pdlim4P70271 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC10.84□□□□□ -0.67
Pdlim4P70271 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.84□□□□□ -0.67
Pdlim4P70271 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Pdlim4P70271 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC10.84□□□□□ -0.67
Pdlim4P70271 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Pdlim4P70271 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pdlim4P70271 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Pdlim4P70271 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.84□□□□□ -0.67
Pdlim4P70271 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pdlim4P70271 Gm27839-201ENSMUST00000184242 106 ntBASIC10.84□□□□□ -0.67
Pdlim4P70271 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.84□□□□□ -0.67
Pdlim4P70271 Gm9124-201ENSMUST00000191789 1092 ntBASIC10.84□□□□□ -0.67
Pdlim4P70271 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Gm9113-201ENSMUST00000192510 1018 ntBASIC10.84□□□□□ -0.67
Pdlim4P70271 Gm9131-201ENSMUST00000193557 1089 ntBASIC10.84□□□□□ -0.67
Pdlim4P70271 Gm9121-201ENSMUST00000193749 1071 ntBASIC10.84□□□□□ -0.67
Pdlim4P70271 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pdlim4P70271 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC10.84□□□□□ -0.67
Pdlim4P70271 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.84□□□□□ -0.67
Pdlim4P70271 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.84□□□□□ -0.67
Pdlim4P70271 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pdlim4P70271 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms