Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Lsm6P62313 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.42□□□□□ -0.58
Lsm6P62313 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.42□□□□□ -0.58
Lsm6P62313 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Mir686-201ENSMUST00000102174 109 ntBASIC11.42□□□□□ -0.58
Lsm6P62313 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Lsm6P62313 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Lsm6P62313 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.42□□□□□ -0.58
Lsm6P62313 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Gm45384-201ENSMUST00000210451 277 ntBASIC11.42□□□□□ -0.58
Lsm6P62313 Gm9908-201ENSMUST00000211534 448 ntBASIC11.42□□□□□ -0.58
Lsm6P62313 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Lsm6P62313 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Lsm6P62313 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.42□□□□□ -0.58
Lsm6P62313 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.42□□□□□ -0.58
Lsm6P62313 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.42□□□□□ -0.58
Lsm6P62313 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Lsm6P62313 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
Lsm6P62313 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
Lsm6P62313 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.41□□□□□ -0.58
Lsm6P62313 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Lsm6P62313 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Gm8213-201ENSMUST00000118191 441 ntBASIC11.41□□□□□ -0.58
Lsm6P62313 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.41□□□□□ -0.58
Lsm6P62313 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.41□□□□□ -0.58
Lsm6P62313 Gm6745-201ENSMUST00000199216 526 ntBASIC11.41□□□□□ -0.58
Lsm6P62313 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.41□□□□□ -0.58
Lsm6P62313 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.41□□□□□ -0.58
Lsm6P62313 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.41□□□□□ -0.58
Lsm6P62313 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.41□□□□□ -0.58
Lsm6P62313 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Lsm6P62313 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Pck2-205ENSMUST00000226352 2784 ntBASIC11.41□□□□□ -0.58
Lsm6P62313 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.41□□□□□ -0.58
Lsm6P62313 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Lsm6P62313 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Lsm6P62313 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lsm6P62313 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms