Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm3P62311 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lsm3P62311 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Lsm3P62311 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Lsm3P62311 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC11.81□□□□□ -0.52
Lsm3P62311 Gm28033-201ENSMUST00000184224 96 ntBASIC11.81□□□□□ -0.52
Lsm3P62311 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.81□□□□□ -0.52
Lsm3P62311 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.81□□□□□ -0.52
Lsm3P62311 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.81□□□□□ -0.52
Lsm3P62311 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.81□□□□□ -0.52
Lsm3P62311 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Lsm3P62311 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lsm3P62311 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.8□□□□□ -0.52
Lsm3P62311 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.8□□□□□ -0.52
Lsm3P62311 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.8□□□□□ -0.52
Lsm3P62311 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Lsm3P62311 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Lsm3P62311 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
Lsm3P62311 Gm6226-201ENSMUST00000117765 1146 ntBASIC11.8□□□□□ -0.52
Lsm3P62311 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.8□□□□□ -0.52
Lsm3P62311 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.8□□□□□ -0.52
Lsm3P62311 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.8□□□□□ -0.52
Lsm3P62311 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.8□□□□□ -0.52
Lsm3P62311 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.8□□□□□ -0.52
Lsm3P62311 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.8□□□□□ -0.52
Lsm3P62311 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.8□□□□□ -0.52
Lsm3P62311 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Lsm3P62311 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.8□□□□□ -0.52
Lsm3P62311 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lsm3P62311 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Lsm3P62311 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm3P62311 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Lsm3P62311 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Lsm3P62311 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm3P62311 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm3P62311 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm3P62311 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm3P62311 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm3P62311 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm3P62311 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Lsm3P62311 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm3P62311 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.79□□□□□ -0.52
Lsm3P62311 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm3P62311 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm3P62311 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Lsm3P62311 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Lsm3P62311 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms