Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mmp20P57748 Mir339-201ENSMUST00000083659 96 ntBASIC14.81□□□□□ -0.04
Mmp20P57748 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mmp20P57748 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mmp20P57748 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mmp20P57748 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mmp20P57748 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mmp20P57748 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Mmp20P57748 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Mmp20P57748 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mmp20P57748 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mmp20P57748 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mmp20P57748 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Mmp20P57748 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mmp20P57748 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mmp20P57748 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mmp20P57748 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Mmp20P57748 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Mmp20P57748 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.81□□□□□ -0.04
Mmp20P57748 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp20P57748 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Mmp20P57748 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Mmp20P57748 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp20P57748 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp20P57748 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Mmp20P57748 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp20P57748 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp20P57748 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.8□□□□□ -0.04
Mmp20P57748 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Mmp20P57748 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp20P57748 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.8□□□□□ -0.04
Mmp20P57748 Gm22334-201ENSMUST00000158070 133 ntBASIC14.8□□□□□ -0.04
Mmp20P57748 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
Mmp20P57748 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.8□□□□□ -0.04
Mmp20P57748 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp20P57748 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp20P57748 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Mmp20P57748 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp20P57748 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp20P57748 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.8□□□□□ -0.04
Mmp20P57748 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Mmp20P57748 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp20P57748 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp20P57748 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp20P57748 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp20P57748 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp20P57748 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp20P57748 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.8□□□□□ -0.04
Mmp20P57748 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp20P57748 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp20P57748 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp20P57748 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp20P57748 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Mmp20P57748 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp20P57748 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp20P57748 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Mmp20P57748 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp20P57748 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.79□□□□□ -0.04
Mmp20P57748 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp20P57748 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
Mmp20P57748 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp20P57748 Gm13296-201ENSMUST00000117854 997 ntBASIC14.79□□□□□ -0.04
Mmp20P57748 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.79□□□□□ -0.04
Mmp20P57748 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.79□□□□□ -0.04
Mmp20P57748 Gm11331-201ENSMUST00000119764 288 ntBASIC14.79□□□□□ -0.04
Mmp20P57748 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp20P57748 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp20P57748 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp20P57748 Gm24514-201ENSMUST00000174961 285 ntBASIC14.79□□□□□ -0.04
Mmp20P57748 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp20P57748 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp20P57748 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.79□□□□□ -0.04
Mmp20P57748 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.79□□□□□ -0.04
Mmp20P57748 Gm43378-201ENSMUST00000199336 582 ntBASIC14.79□□□□□ -0.04
Mmp20P57748 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.79□□□□□ -0.04
Mmp20P57748 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Mmp20P57748 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.79□□□□□ -0.04
Mmp20P57748 Gm8959-201ENSMUST00000213150 571 ntBASIC14.79□□□□□ -0.04
Mmp20P57748 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Mmp20P57748 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp20P57748 Gzmn-202ENSMUST00000225535 989 ntBASIC14.79□□□□□ -0.04
Mmp20P57748 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.79□□□□□ -0.04
Mmp20P57748 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp20P57748 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp20P57748 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp20P57748 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Mmp20P57748 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp20P57748 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.79□□□□□ -0.04
Mmp20P57748 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Mmp20P57748 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Mmp20P57748 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp20P57748 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.78□□□□□ -0.04
Mmp20P57748 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp20P57748 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp20P57748 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp20P57748 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp20P57748 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp20P57748 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Mmp20P57748 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Mmp20P57748 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms