Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Gm13097-201ENSMUST00000210722 397 ntBASIC13.19□□□□□ -0.3
Ddx6P54823 Gm5950-201ENSMUST00000213337 772 ntBASIC13.19□□□□□ -0.3
Ddx6P54823 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.19□□□□□ -0.3
Ddx6P54823 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx6P54823 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx6P54823 Gm22042-201ENSMUST00000082989 165 ntBASIC13.19□□□□□ -0.3
Ddx6P54823 Gm26232-201ENSMUST00000083360 166 ntBASIC13.19□□□□□ -0.3
Ddx6P54823 Gm24136-201ENSMUST00000083374 165 ntBASIC13.19□□□□□ -0.3
Ddx6P54823 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.19□□□□□ -0.3
Ddx6P54823 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.19□□□□□ -0.3
Ddx6P54823 Gm26110-201ENSMUST00000083971 165 ntBASIC13.19□□□□□ -0.3
Ddx6P54823 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ddx6P54823 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.19□□□□□ -0.3
Ddx6P54823 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.19□□□□□ -0.3
Ddx6P54823 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.19□□□□□ -0.3
Ddx6P54823 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx6P54823 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx6P54823 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx6P54823 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx6P54823 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ddx6P54823 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx6P54823 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.19□□□□□ -0.3
Ddx6P54823 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx6P54823 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx6P54823 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx6P54823 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx6P54823 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx6P54823 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.18□□□□□ -0.3
Ddx6P54823 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ddx6P54823 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.18□□□□□ -0.3
Ddx6P54823 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.18□□□□□ -0.3
Ddx6P54823 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ddx6P54823 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.18□□□□□ -0.3
Ddx6P54823 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.18□□□□□ -0.3
Ddx6P54823 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.18□□□□□ -0.3
Ddx6P54823 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.18□□□□□ -0.3
Ddx6P54823 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.18□□□□□ -0.3
Ddx6P54823 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 Mir339-201ENSMUST00000083659 96 ntBASIC13.18□□□□□ -0.3
Ddx6P54823 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.18□□□□□ -0.3
Ddx6P54823 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ddx6P54823 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Ddx6P54823 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ddx6P54823 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ddx6P54823 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ddx6P54823 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.18□□□□□ -0.3
Ddx6P54823 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx6P54823 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.18□□□□□ -0.3
Ddx6P54823 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.17□□□□□ -0.3
Ddx6P54823 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.17□□□□□ -0.3
Ddx6P54823 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ddx6P54823 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.17□□□□□ -0.3
Ddx6P54823 Gm11930-201ENSMUST00000117788 190 ntBASIC13.17□□□□□ -0.3
Ddx6P54823 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.17□□□□□ -0.3
Ddx6P54823 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Gm37466-201ENSMUST00000195692 652 ntBASIC13.17□□□□□ -0.3
Ddx6P54823 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.17□□□□□ -0.3
Ddx6P54823 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.17□□□□□ -0.3
Ddx6P54823 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Ddx6P54823 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx6P54823 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms