Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lbx1P52955 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lbx1P52955 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lbx1P52955 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lbx1P52955 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lbx1P52955 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lbx1P52955 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lbx1P52955 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lbx1P52955 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.57□□□□□ -0.4
Lbx1P52955 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lbx1P52955 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Lbx1P52955 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lbx1P52955 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lbx1P52955 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lbx1P52955 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lbx1P52955 Mir671-201ENSMUST00000102432 98 ntBASIC12.57□□□□□ -0.4
Lbx1P52955 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.57□□□□□ -0.4
Lbx1P52955 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.57□□□□□ -0.4
Lbx1P52955 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.57□□□□□ -0.4
Lbx1P52955 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lbx1P52955 Gm28071-201ENSMUST00000190355 478 ntBASIC12.57□□□□□ -0.4
Lbx1P52955 Gm28693-202ENSMUST00000190758 331 ntBASIC12.57□□□□□ -0.4
Lbx1P52955 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Lbx1P52955 Gm2517-201ENSMUST00000215651 348 ntBASIC12.57□□□□□ -0.4
Lbx1P52955 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.57□□□□□ -0.4
Lbx1P52955 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.57□□□□□ -0.4
Lbx1P52955 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.57□□□□□ -0.4
Lbx1P52955 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lbx1P52955 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lbx1P52955 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.57□□□□□ -0.4
Lbx1P52955 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lbx1P52955 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.57□□□□□ -0.4
Lbx1P52955 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lbx1P52955 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.57□□□□□ -0.4
Lbx1P52955 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.57□□□□□ -0.4
Lbx1P52955 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lbx1P52955 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Lbx1P52955 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.57□□□□□ -0.4
Lbx1P52955 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lbx1P52955 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lbx1P52955 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lbx1P52955 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lbx1P52955 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lbx1P52955 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.56□□□□□ -0.4
Lbx1P52955 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.56□□□□□ -0.4
Lbx1P52955 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Lbx1P52955 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lbx1P52955 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.56□□□□□ -0.4
Lbx1P52955 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lbx1P52955 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Lbx1P52955 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lbx1P52955 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lbx1P52955 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lbx1P52955 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lbx1P52955 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lbx1P52955 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.56□□□□□ -0.4
Lbx1P52955 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lbx1P52955 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.56□□□□□ -0.4
Lbx1P52955 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lbx1P52955 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lbx1P52955 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lbx1P52955 Mir744-201ENSMUST00000103261 100 ntBASIC12.56□□□□□ -0.4
Lbx1P52955 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.56□□□□□ -0.4
Lbx1P52955 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lbx1P52955 Gm15573-201ENSMUST00000119487 540 ntBASIC12.56□□□□□ -0.4
Lbx1P52955 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.56□□□□□ -0.4
Lbx1P52955 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lbx1P52955 Gm22442-201ENSMUST00000157256 144 ntBASIC12.56□□□□□ -0.4
Lbx1P52955 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lbx1P52955 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lbx1P52955 Mir7076-201ENSMUST00000183519 74 ntBASIC12.56□□□□□ -0.4
Lbx1P52955 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lbx1P52955 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.56□□□□□ -0.4
Lbx1P52955 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC12.56□□□□□ -0.4
Lbx1P52955 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC12.56□□□□□ -0.4
Lbx1P52955 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.56□□□□□ -0.4
Lbx1P52955 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.56□□□□□ -0.4
Lbx1P52955 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lbx1P52955 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lbx1P52955 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lbx1P52955 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Lbx1P52955 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lbx1P52955 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lbx1P52955 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lbx1P52955 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lbx1P52955 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Lbx1P52955 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.56□□□□□ -0.4
Lbx1P52955 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lbx1P52955 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lbx1P52955 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lbx1P52955 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Lbx1P52955 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lbx1P52955 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lbx1P52955 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lbx1P52955 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lbx1P52955 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lbx1P52955 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lbx1P52955 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
Lbx1P52955 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lbx1P52955 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms