Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.78□□□□□ -0.68
Nkx2-1P50220 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Nkx2-1P50220 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Gm15393-201ENSMUST00000120499 219 ntBASIC10.78□□□□□ -0.68
Nkx2-1P50220 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Gm27622-201ENSMUST00000183779 60 ntBASIC10.78□□□□□ -0.68
Nkx2-1P50220 Gm28630-201ENSMUST00000187806 498 ntBASIC10.78□□□□□ -0.68
Nkx2-1P50220 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.78□□□□□ -0.68
Nkx2-1P50220 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.78□□□□□ -0.68
Nkx2-1P50220 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx2-1P50220 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.78□□□□□ -0.68
Nkx2-1P50220 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.78□□□□□ -0.68
Nkx2-1P50220 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Nkx2-1P50220 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Nkx2-1P50220 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nkx2-1P50220 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nkx2-1P50220 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nkx2-1P50220 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nkx2-1P50220 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Nkx2-1P50220 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nkx2-1P50220 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nkx2-1P50220 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.77□□□□□ -0.68
Nkx2-1P50220 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx2-1P50220 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC10.77□□□□□ -0.69
Nkx2-1P50220 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Gm37171-201ENSMUST00000192636 1185 ntBASIC10.77□□□□□ -0.69
Nkx2-1P50220 Gm10766-202ENSMUST00000194123 606 ntBASIC10.77□□□□□ -0.69
Nkx2-1P50220 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.77□□□□□ -0.69
Nkx2-1P50220 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.77□□□□□ -0.69
Nkx2-1P50220 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Nkx2-1P50220 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.76□□□□□ -0.69
Nkx2-1P50220 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Gm9229-201ENSMUST00000222777 126 ntBASIC10.76□□□□□ -0.69
Nkx2-1P50220 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Nkx2-1P50220 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms