Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
TgfaP48030 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
TgfaP48030 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TgfaP48030 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
TgfaP48030 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
TgfaP48030 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.27□□□□□ -0.6
TgfaP48030 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TgfaP48030 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TgfaP48030 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TgfaP48030 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TgfaP48030 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TgfaP48030 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
TgfaP48030 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TgfaP48030 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
TgfaP48030 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TgfaP48030 Snord83b-201ENSMUST00000104546 94 ntBASIC11.27□□□□□ -0.61
TgfaP48030 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
TgfaP48030 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TgfaP48030 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
TgfaP48030 Gm13875-201ENSMUST00000120162 282 ntBASIC11.27□□□□□ -0.61
TgfaP48030 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.27□□□□□ -0.61
TgfaP48030 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
TgfaP48030 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.27□□□□□ -0.61
TgfaP48030 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.27□□□□□ -0.61
TgfaP48030 Gm44405-201ENSMUST00000198952 126 ntBASIC11.27□□□□□ -0.61
TgfaP48030 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.27□□□□□ -0.61
TgfaP48030 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.27□□□□□ -0.61
TgfaP48030 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TgfaP48030 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TgfaP48030 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TgfaP48030 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TgfaP48030 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
TgfaP48030 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TgfaP48030 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TgfaP48030 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TgfaP48030 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TgfaP48030 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TgfaP48030 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
TgfaP48030 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TgfaP48030 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.27□□□□□ -0.61
TgfaP48030 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
TgfaP48030 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
TgfaP48030 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
TgfaP48030 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
TgfaP48030 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Gm12058-201ENSMUST00000118614 437 ntBASIC11.26□□□□□ -0.61
TgfaP48030 Gm12134-201ENSMUST00000122109 520 ntBASIC11.26□□□□□ -0.61
TgfaP48030 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
TgfaP48030 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.26□□□□□ -0.61
TgfaP48030 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.26□□□□□ -0.61
TgfaP48030 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.26□□□□□ -0.61
TgfaP48030 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.26□□□□□ -0.61
TgfaP48030 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
TgfaP48030 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
TgfaP48030 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
TgfaP48030 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
TgfaP48030 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TgfaP48030 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.25□□□□□ -0.61
TgfaP48030 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.25□□□□□ -0.61
TgfaP48030 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.25□□□□□ -0.61
TgfaP48030 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
TgfaP48030 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms