Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.57□□□□□ -0.4
Sox18P43680 Gm20426-201ENSMUST00000173657 440 ntBASIC12.57□□□□□ -0.4
Sox18P43680 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox18P43680 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox18P43680 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox18P43680 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.57□□□□□ -0.4
Sox18P43680 AA914427-201ENSMUST00000193194 1166 ntBASIC12.57□□□□□ -0.4
Sox18P43680 Gm37709-201ENSMUST00000195074 600 ntBASIC12.57□□□□□ -0.4
Sox18P43680 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox18P43680 Gm44100-201ENSMUST00000204329 436 ntBASIC12.57□□□□□ -0.4
Sox18P43680 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox18P43680 AC159205.7-201ENSMUST00000225988 692 ntBASIC12.57□□□□□ -0.4
Sox18P43680 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox18P43680 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox18P43680 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox18P43680 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox18P43680 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox18P43680 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox18P43680 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox18P43680 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Sox18P43680 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox18P43680 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox18P43680 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox18P43680 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox18P43680 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox18P43680 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Sox18P43680 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox18P43680 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox18P43680 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Sox18P43680 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox18P43680 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox18P43680 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Sox18P43680 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox18P43680 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Sox18P43680 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sox18P43680 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox18P43680 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox18P43680 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox18P43680 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox18P43680 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Sox18P43680 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox18P43680 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox18P43680 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Sox18P43680 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.56□□□□□ -0.4
Sox18P43680 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox18P43680 Gm9550-201ENSMUST00000161130 862 ntBASIC12.56□□□□□ -0.4
Sox18P43680 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox18P43680 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.56□□□□□ -0.4
Sox18P43680 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC12.56□□□□□ -0.4
Sox18P43680 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.56□□□□□ -0.4
Sox18P43680 Gm28450-201ENSMUST00000187349 638 ntBASIC12.56□□□□□ -0.4
Sox18P43680 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.56□□□□□ -0.4
Sox18P43680 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.56□□□□□ -0.4
Sox18P43680 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sox18P43680 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Sox18P43680 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox18P43680 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox18P43680 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox18P43680 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox18P43680 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox18P43680 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox18P43680 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.56□□□□□ -0.4
Sox18P43680 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox18P43680 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox18P43680 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox18P43680 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox18P43680 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.56□□□□□ -0.4
Sox18P43680 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox18P43680 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox18P43680 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.55□□□□□ -0.4
Sox18P43680 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sox18P43680 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sox18P43680 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Gm23270-201ENSMUST00000104055 131 ntBASIC12.55□□□□□ -0.4
Sox18P43680 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.55□□□□□ -0.4
Sox18P43680 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.55□□□□□ -0.4
Sox18P43680 Gm26185-201ENSMUST00000157692 266 ntBASIC12.55□□□□□ -0.4
Sox18P43680 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC12.55□□□□□ -0.4
Sox18P43680 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.55□□□□□ -0.4
Sox18P43680 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.55□□□□□ -0.4
Sox18P43680 Gm34272-201ENSMUST00000208886 253 ntBASIC12.55□□□□□ -0.4
Sox18P43680 Gm45118-201ENSMUST00000208928 825 ntBASIC12.55□□□□□ -0.4
Sox18P43680 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.55□□□□□ -0.4
Sox18P43680 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox18P43680 Acot6-202ENSMUST00000222921 3622 ntBASIC12.55□□□□□ -0.4
Sox18P43680 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms