Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Cdx2P43241 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdx2P43241 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.31□□□□□ -0.44
Cdx2P43241 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cdx2P43241 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cdx2P43241 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
Cdx2P43241 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.31□□□□□ -0.44
Cdx2P43241 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.31□□□□□ -0.44
Cdx2P43241 Gm9083-201ENSMUST00000120423 819 ntBASIC12.31□□□□□ -0.44
Cdx2P43241 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.31□□□□□ -0.44
Cdx2P43241 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Cdx2P43241 Gm22334-201ENSMUST00000158070 133 ntBASIC12.31□□□□□ -0.44
Cdx2P43241 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cdx2P43241 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Mir7221-201ENSMUST00000184009 72 ntBASIC12.31□□□□□ -0.44
Cdx2P43241 Gm37201-201ENSMUST00000191845 523 ntBASIC12.31□□□□□ -0.44
Cdx2P43241 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.31□□□□□ -0.44
Cdx2P43241 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.31□□□□□ -0.44
Cdx2P43241 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.31□□□□□ -0.44
Cdx2P43241 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cdx2P43241 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdx2P43241 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Cdx2P43241 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdx2P43241 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cdx2P43241 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.3□□□□□ -0.44
Cdx2P43241 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cdx2P43241 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cdx2P43241 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.3□□□□□ -0.44
Cdx2P43241 Gm13736-201ENSMUST00000119272 253 ntBASIC12.3□□□□□ -0.44
Cdx2P43241 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.3□□□□□ -0.44
Cdx2P43241 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Cdx2P43241 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Gm44651-201ENSMUST00000207343 372 ntBASIC12.3□□□□□ -0.44
Cdx2P43241 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.3□□□□□ -0.44
Cdx2P43241 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cdx2P43241 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cdx2P43241 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cdx2P43241 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Cdx2P43241 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Cdx2P43241 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdx2P43241 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Cdx2P43241 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Cdx2P43241 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms