Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cd27P41272 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cd27P41272 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cd27P41272 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cd27P41272 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cd27P41272 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cd27P41272 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cd27P41272 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cd27P41272 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cd27P41272 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cd27P41272 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cd27P41272 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Cd27P41272 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cd27P41272 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.43□□□□□ -0.74
Cd27P41272 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.43□□□□□ -0.74
Cd27P41272 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Cd27P41272 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cd27P41272 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cd27P41272 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cd27P41272 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cd27P41272 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cd27P41272 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cd27P41272 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Cd27P41272 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.43□□□□□ -0.74
Cd27P41272 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cd27P41272 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cd27P41272 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.43□□□□□ -0.74
Cd27P41272 Mir7085-201ENSMUST00000184353 66 ntBASIC10.43□□□□□ -0.74
Cd27P41272 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cd27P41272 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.43□□□□□ -0.74
Cd27P41272 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.43□□□□□ -0.74
Cd27P41272 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.43□□□□□ -0.74
Cd27P41272 Gm6007-201ENSMUST00000208170 823 ntBASIC10.43□□□□□ -0.74
Cd27P41272 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.43□□□□□ -0.74
Cd27P41272 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.43□□□□□ -0.74
Cd27P41272 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cd27P41272 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Cd27P41272 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.43□□□□□ -0.74
Cd27P41272 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.43□□□□□ -0.74
Cd27P41272 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Cd27P41272 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cd27P41272 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.43□□□□□ -0.74
Cd27P41272 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.43□□□□□ -0.74
Cd27P41272 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cd27P41272 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cd27P41272 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cd27P41272 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cd27P41272 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cd27P41272 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cd27P41272 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.42□□□□□ -0.74
Cd27P41272 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Cd27P41272 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Cd27P41272 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Cd27P41272 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Cd27P41272 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.42□□□□□ -0.74
Cd27P41272 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.42□□□□□ -0.74
Cd27P41272 Gm13226-201ENSMUST00000117838 404 ntBASIC10.42□□□□□ -0.74
Cd27P41272 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.42□□□□□ -0.74
Cd27P41272 Gm11425-201ENSMUST00000119608 498 ntBASIC10.42□□□□□ -0.74
Cd27P41272 Gm14660-201ENSMUST00000119809 575 ntBASIC10.42□□□□□ -0.74
Cd27P41272 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.42□□□□□ -0.74
Cd27P41272 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.42□□□□□ -0.74
Cd27P41272 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.42□□□□□ -0.74
Cd27P41272 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC10.42□□□□□ -0.74
Cd27P41272 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Cd27P41272 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.42□□□□□ -0.74
Cd27P41272 Gm32025-201ENSMUST00000217960 307 ntBASIC10.42□□□□□ -0.74
Cd27P41272 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Gm9396-201ENSMUST00000076703 567 ntBASIC10.42□□□□□ -0.74
Cd27P41272 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cd27P41272 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.41□□□□□ -0.74
Cd27P41272 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms