Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox6P40645 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox6P40645 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.22□□□□□ -0.45
Sox6P40645 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox6P40645 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Sox6P40645 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox6P40645 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox6P40645 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox6P40645 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox6P40645 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.22□□□□□ -0.45
Sox6P40645 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox6P40645 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sox6P40645 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.22□□□□□ -0.45
Sox6P40645 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sox6P40645 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox6P40645 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox6P40645 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox6P40645 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.22□□□□□ -0.45
Sox6P40645 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox6P40645 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.22□□□□□ -0.45
Sox6P40645 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Sox6P40645 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.22□□□□□ -0.45
Sox6P40645 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.22□□□□□ -0.45
Sox6P40645 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.22□□□□□ -0.45
Sox6P40645 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox6P40645 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sox6P40645 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sox6P40645 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.22□□□□□ -0.45
Sox6P40645 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox6P40645 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox6P40645 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox6P40645 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.22□□□□□ -0.45
Sox6P40645 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Sox6P40645 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.22□□□□□ -0.45
Sox6P40645 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox6P40645 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox6P40645 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox6P40645 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox6P40645 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox6P40645 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox6P40645 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Sox6P40645 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox6P40645 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sox6P40645 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sox6P40645 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox6P40645 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.21□□□□□ -0.45
Sox6P40645 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox6P40645 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.21□□□□□ -0.45
Sox6P40645 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox6P40645 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox6P40645 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.21□□□□□ -0.45
Sox6P40645 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox6P40645 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.21□□□□□ -0.45
Sox6P40645 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sox6P40645 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox6P40645 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.21□□□□□ -0.45
Sox6P40645 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox6P40645 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox6P40645 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox6P40645 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox6P40645 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox6P40645 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.21□□□□□ -0.45
Sox6P40645 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox6P40645 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Sox6P40645 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.21□□□□□ -0.45
Sox6P40645 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.21□□□□□ -0.45
Sox6P40645 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.21□□□□□ -0.45
Sox6P40645 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.21□□□□□ -0.45
Sox6P40645 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.21□□□□□ -0.45
Sox6P40645 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.21□□□□□ -0.45
Sox6P40645 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sox6P40645 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.21□□□□□ -0.45
Sox6P40645 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox6P40645 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sox6P40645 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.21□□□□□ -0.45
Sox6P40645 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.21□□□□□ -0.45
Sox6P40645 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Sox6P40645 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.21□□□□□ -0.45
Sox6P40645 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.21□□□□□ -0.45
Sox6P40645 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sox6P40645 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sox6P40645 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox6P40645 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sox6P40645 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Sox6P40645 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox6P40645 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.21□□□□□ -0.46
Sox6P40645 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox6P40645 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.21□□□□□ -0.46
Sox6P40645 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox6P40645 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox6P40645 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox6P40645 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Sox6P40645 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sox6P40645 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Sox6P40645 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox6P40645 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms