Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TfamP40630 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TfamP40630 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TfamP40630 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
TfamP40630 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TfamP40630 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.6□□□□□ -0.39
TfamP40630 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.6□□□□□ -0.39
TfamP40630 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.6□□□□□ -0.39
TfamP40630 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TfamP40630 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.6□□□□□ -0.39
TfamP40630 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TfamP40630 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TfamP40630 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
TfamP40630 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.6□□□□□ -0.39
TfamP40630 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TfamP40630 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
TfamP40630 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
TfamP40630 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.59□□□□□ -0.39
TfamP40630 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TfamP40630 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.59□□□□□ -0.39
TfamP40630 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.59□□□□□ -0.39
TfamP40630 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.59□□□□□ -0.39
TfamP40630 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.59□□□□□ -0.39
TfamP40630 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.59□□□□□ -0.39
TfamP40630 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
TfamP40630 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.59□□□□□ -0.39
TfamP40630 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.59□□□□□ -0.39
TfamP40630 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
TfamP40630 Gm18307-201ENSMUST00000206864 949 ntBASIC12.59□□□□□ -0.39
TfamP40630 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.59□□□□□ -0.39
TfamP40630 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.59□□□□□ -0.39
TfamP40630 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.59□□□□□ -0.39
TfamP40630 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
TfamP40630 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.59□□□□□ -0.39
TfamP40630 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TfamP40630 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TfamP40630 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.58□□□□□ -0.39
TfamP40630 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TfamP40630 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms