Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl12P40224 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl12P40224 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl12P40224 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl12P40224 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cxcl12P40224 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl12P40224 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl12P40224 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl12P40224 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl12P40224 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl12P40224 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Cxcl12P40224 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.31□□□□□ -0.28
Cxcl12P40224 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cxcl12P40224 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.31□□□□□ -0.28
Cxcl12P40224 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl12P40224 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cxcl12P40224 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cxcl12P40224 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cxcl12P40224 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cxcl12P40224 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cxcl12P40224 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.3□□□□□ -0.28
Cxcl12P40224 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.3□□□□□ -0.28
Cxcl12P40224 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.3□□□□□ -0.28
Cxcl12P40224 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Cxcl12P40224 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Cxcl12P40224 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cxcl12P40224 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cxcl12P40224 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.3□□□□□ -0.28
Cxcl12P40224 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.3□□□□□ -0.28
Cxcl12P40224 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.3□□□□□ -0.28
Cxcl12P40224 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.3□□□□□ -0.28
Cxcl12P40224 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.3□□□□□ -0.28
Cxcl12P40224 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cxcl12P40224 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl12P40224 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.29□□□□□ -0.28
Cxcl12P40224 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Cxcl12P40224 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cxcl12P40224 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.29□□□□□ -0.28
Cxcl12P40224 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cxcl12P40224 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Cxcl12P40224 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Cxcl12P40224 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.29□□□□□ -0.28
Cxcl12P40224 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cxcl12P40224 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.29□□□□□ -0.28
Cxcl12P40224 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.29□□□□□ -0.28
Cxcl12P40224 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cxcl12P40224 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cxcl12P40224 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Cxcl12P40224 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cxcl12P40224 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms