Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.68□□□□□ -0.7
Timp3P39876 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.68□□□□□ -0.7
Timp3P39876 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.68□□□□□ -0.7
Timp3P39876 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC10.68□□□□□ -0.7
Timp3P39876 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.68□□□□□ -0.7
Timp3P39876 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Timp3P39876 Gm13392-201ENSMUST00000117708 150 ntBASIC10.68□□□□□ -0.7
Timp3P39876 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.68□□□□□ -0.7
Timp3P39876 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.68□□□□□ -0.7
Timp3P39876 Gm8062-201ENSMUST00000139696 444 ntBASIC10.68□□□□□ -0.7
Timp3P39876 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Timp3P39876 Gm5370-201ENSMUST00000187187 574 ntBASIC10.68□□□□□ -0.7
Timp3P39876 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.68□□□□□ -0.7
Timp3P39876 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC10.68□□□□□ -0.7
Timp3P39876 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.68□□□□□ -0.7
Timp3P39876 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.68□□□□□ -0.7
Timp3P39876 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.68□□□□□ -0.7
Timp3P39876 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.68□□□□□ -0.7
Timp3P39876 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Timp3P39876 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.68□□□□□ -0.7
Timp3P39876 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.68□□□□□ -0.7
Timp3P39876 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.68□□□□□ -0.7
Timp3P39876 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Timp3P39876 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Timp3P39876 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Timp3P39876 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.67□□□□□ -0.7
Timp3P39876 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Timp3P39876 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Timp3P39876 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Timp3P39876 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Timp3P39876 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.67□□□□□ -0.7
Timp3P39876 Gm16177-201ENSMUST00000120728 718 ntBASIC10.67□□□□□ -0.7
Timp3P39876 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Gm4271-201ENSMUST00000174444 973 ntBASIC10.67□□□□□ -0.7
Timp3P39876 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.67□□□□□ -0.7
Timp3P39876 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.67□□□□□ -0.7
Timp3P39876 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Timp3P39876 Gm6007-201ENSMUST00000208170 823 ntBASIC10.67□□□□□ -0.7
Timp3P39876 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.67□□□□□ -0.7
Timp3P39876 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Timp3P39876 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Timp3P39876 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Timp3P39876 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Timp3P39876 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Timp3P39876 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 109.5 ms