Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.62□□□□□ -0.39
Hoxc11P31313 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Hoxc11P31313 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.62□□□□□ -0.39
Hoxc11P31313 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc11P31313 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc11P31313 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc11P31313 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc11P31313 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hoxc11P31313 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc11P31313 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc11P31313 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc11P31313 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc11P31313 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.62□□□□□ -0.39
Hoxc11P31313 Gm16202-201ENSMUST00000117532 544 ntBASIC12.62□□□□□ -0.39
Hoxc11P31313 Gm13123-201ENSMUST00000122173 492 ntBASIC12.62□□□□□ -0.39
Hoxc11P31313 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc11P31313 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Hoxc11P31313 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.62□□□□□ -0.39
Hoxc11P31313 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc11P31313 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
Hoxc11P31313 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc11P31313 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.62□□□□□ -0.39
Hoxc11P31313 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc11P31313 Gm45880-201ENSMUST00000213041 853 ntBASIC12.62□□□□□ -0.39
Hoxc11P31313 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc11P31313 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.62□□□□□ -0.39
Hoxc11P31313 Gm10146-201ENSMUST00000072739 309 ntBASIC12.62□□□□□ -0.39
Hoxc11P31313 Snora73a-201ENSMUST00000082453 205 ntBASIC12.62□□□□□ -0.39
Hoxc11P31313 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc11P31313 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc11P31313 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc11P31313 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc11P31313 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc11P31313 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Hoxc11P31313 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.62□□□□□ -0.39
Hoxc11P31313 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.62□□□□□ -0.39
Hoxc11P31313 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Hoxc11P31313 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Hoxc11P31313 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc11P31313 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc11P31313 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hoxc11P31313 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hoxc11P31313 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hoxc11P31313 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Hoxc11P31313 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.61□□□□□ -0.39
Hoxc11P31313 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.61□□□□□ -0.39
Hoxc11P31313 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.61□□□□□ -0.39
Hoxc11P31313 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.61□□□□□ -0.39
Hoxc11P31313 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.61□□□□□ -0.39
Hoxc11P31313 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hoxc11P31313 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.61□□□□□ -0.39
Hoxc11P31313 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hoxc11P31313 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Hoxc11P31313 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.61□□□□□ -0.39
Hoxc11P31313 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc11P31313 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc11P31313 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc11P31313 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc11P31313 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc11P31313 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc11P31313 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc11P31313 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc11P31313 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc11P31313 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc11P31313 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc11P31313 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc11P31313 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc11P31313 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Hoxc11P31313 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc11P31313 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc11P31313 Gm2231-201ENSMUST00000125661 612 ntBASIC12.6□□□□□ -0.39
Hoxc11P31313 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc11P31313 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.6□□□□□ -0.39
Hoxc11P31313 Gm7029-201ENSMUST00000173226 450 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 329.8 ms