Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col8a2P25318 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Col8a2P25318 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a2P25318 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a2P25318 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a2P25318 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a2P25318 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a2P25318 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a2P25318 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a2P25318 Gm2231-201ENSMUST00000125661 612 ntBASIC10.85□□□□□ -0.67
Col8a2P25318 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a2P25318 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a2P25318 Gm27501-201ENSMUST00000183599 107 ntBASIC10.85□□□□□ -0.67
Col8a2P25318 Mir7221-201ENSMUST00000184009 72 ntBASIC10.85□□□□□ -0.67
Col8a2P25318 Gm43118-201ENSMUST00000199149 775 ntBASIC10.85□□□□□ -0.67
Col8a2P25318 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a2P25318 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Col8a2P25318 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a2P25318 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a2P25318 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a2P25318 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a2P25318 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a2P25318 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a2P25318 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a2P25318 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a2P25318 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a2P25318 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a2P25318 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a2P25318 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a2P25318 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Col8a2P25318 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a2P25318 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Col8a2P25318 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC10.84□□□□□ -0.67
Col8a2P25318 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Col8a2P25318 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a2P25318 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a2P25318 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a2P25318 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a2P25318 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a2P25318 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a2P25318 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a2P25318 Gm14704-201ENSMUST00000120300 874 ntBASIC10.84□□□□□ -0.67
Col8a2P25318 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.84□□□□□ -0.67
Col8a2P25318 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.84□□□□□ -0.67
Col8a2P25318 Gm3890-201ENSMUST00000182416 207 ntBASIC10.84□□□□□ -0.67
Col8a2P25318 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Col8a2P25318 Gm37042-201ENSMUST00000193816 581 ntBASIC10.84□□□□□ -0.67
Col8a2P25318 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.84□□□□□ -0.67
Col8a2P25318 Gm43133-201ENSMUST00000197472 463 ntBASIC10.84□□□□□ -0.67
Col8a2P25318 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.84□□□□□ -0.67
Col8a2P25318 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Col8a2P25318 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.84□□□□□ -0.67
Col8a2P25318 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a2P25318 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a2P25318 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a2P25318 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a2P25318 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.84□□□□□ -0.67
Col8a2P25318 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.84□□□□□ -0.67
Col8a2P25318 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a2P25318 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a2P25318 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.84□□□□□ -0.67
Col8a2P25318 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Col8a2P25318 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a2P25318 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.84□□□□□ -0.67
Col8a2P25318 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a2P25318 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a2P25318 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a2P25318 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Col8a2P25318 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a2P25318 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Col8a2P25318 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a2P25318 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a2P25318 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a2P25318 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a2P25318 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a2P25318 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Col8a2P25318 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Col8a2P25318 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.84□□□□□ -0.67
Col8a2P25318 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a2P25318 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Col8a2P25318 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.83□□□□□ -0.68
Col8a2P25318 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a2P25318 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Col8a2P25318 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a2P25318 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a2P25318 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a2P25318 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a2P25318 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a2P25318 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a2P25318 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a2P25318 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Col8a2P25318 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Col8a2P25318 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.83□□□□□ -0.68
Col8a2P25318 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.83□□□□□ -0.68
Col8a2P25318 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.83□□□□□ -0.68
Col8a2P25318 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Col8a2P25318 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Col8a2P25318 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Col8a2P25318 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Col8a2P25318 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms