Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Gm16479-201ENSMUST00000121706 932 ntBASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Gm2231-201ENSMUST00000125661 612 ntBASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Gm26185-201ENSMUST00000157692 266 ntBASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tnfrsf1bP25119 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Mir1982-201ENSMUST00000157368 74 ntBASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Gm27731-201ENSMUST00000185192 107 ntBASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Gm18041-201ENSMUST00000218210 618 ntBASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tnfrsf1bP25119 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Tnfrsf1bP25119 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms