Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6bP23440 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6bP23440 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pde6bP23440 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6bP23440 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6bP23440 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.22□□□□□ -0.13
Pde6bP23440 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6bP23440 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pde6bP23440 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pde6bP23440 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pde6bP23440 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pde6bP23440 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pde6bP23440 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 Gm4857-201ENSMUST00000192718 785 ntBASIC14.21□□□□□ -0.13
Pde6bP23440 Gm4768-201ENSMUST00000206199 686 ntBASIC14.21□□□□□ -0.13
Pde6bP23440 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Pde6bP23440 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.21□□□□□ -0.13
Pde6bP23440 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.21□□□□□ -0.13
Pde6bP23440 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
Pde6bP23440 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pde6bP23440 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.21□□□□□ -0.13
Pde6bP23440 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pde6bP23440 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pde6bP23440 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
Pde6bP23440 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pde6bP23440 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Pde6bP23440 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pde6bP23440 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.21□□□□□ -0.14
Pde6bP23440 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.21□□□□□ -0.14
Pde6bP23440 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pde6bP23440 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pde6bP23440 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Pde6bP23440 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6bP23440 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6bP23440 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6bP23440 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6bP23440 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6bP23440 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pde6bP23440 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.2□□□□□ -0.14
Pde6bP23440 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6bP23440 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6bP23440 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.2□□□□□ -0.14
Pde6bP23440 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6bP23440 Gm15370-201ENSMUST00000117158 253 ntBASIC14.2□□□□□ -0.14
Pde6bP23440 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.2□□□□□ -0.14
Pde6bP23440 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6bP23440 Gm37489-201ENSMUST00000191883 159 ntBASIC14.2□□□□□ -0.14
Pde6bP23440 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6bP23440 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.2□□□□□ -0.14
Pde6bP23440 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.2□□□□□ -0.14
Pde6bP23440 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.2□□□□□ -0.14
Pde6bP23440 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pde6bP23440 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.2□□□□□ -0.14
Pde6bP23440 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6bP23440 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6bP23440 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6bP23440 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pde6bP23440 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6bP23440 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6bP23440 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6bP23440 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pde6bP23440 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6bP23440 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6bP23440 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pde6bP23440 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pde6bP23440 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6bP23440 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6bP23440 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6bP23440 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6bP23440 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.19□□□□□ -0.14
Pde6bP23440 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6bP23440 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6bP23440 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pde6bP23440 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.19□□□□□ -0.14
Pde6bP23440 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms