Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clk1P22518 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.46
Clk1P22518 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clk1P22518 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Clk1P22518 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Clk1P22518 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.21□□□□□ -0.46
Clk1P22518 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clk1P22518 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Clk1P22518 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clk1P22518 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clk1P22518 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clk1P22518 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Clk1P22518 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.2□□□□□ -0.46
Clk1P22518 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clk1P22518 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clk1P22518 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Clk1P22518 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clk1P22518 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Clk1P22518 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clk1P22518 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.2□□□□□ -0.46
Clk1P22518 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clk1P22518 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Clk1P22518 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clk1P22518 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clk1P22518 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clk1P22518 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clk1P22518 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clk1P22518 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Clk1P22518 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clk1P22518 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Clk1P22518 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.2□□□□□ -0.46
Clk1P22518 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clk1P22518 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Clk1P22518 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Clk1P22518 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Clk1P22518 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.2□□□□□ -0.46
Clk1P22518 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clk1P22518 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clk1P22518 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clk1P22518 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.19□□□□□ -0.46
Clk1P22518 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Clk1P22518 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Clk1P22518 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Clk1P22518 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Clk1P22518 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.19□□□□□ -0.46
Clk1P22518 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Clk1P22518 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.19□□□□□ -0.46
Clk1P22518 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.19□□□□□ -0.46
Clk1P22518 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.19□□□□□ -0.46
Clk1P22518 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.19□□□□□ -0.46
Clk1P22518 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 Gm2423-201ENSMUST00000074863 733 ntBASIC12.19□□□□□ -0.46
Clk1P22518 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Clk1P22518 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.19□□□□□ -0.46
Clk1P22518 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Clk1P22518 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Clk1P22518 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.19□□□□□ -0.46
Clk1P22518 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Clk1P22518 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clk1P22518 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clk1P22518 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clk1P22518 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clk1P22518 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clk1P22518 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clk1P22518 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.18□□□□□ -0.46
Clk1P22518 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clk1P22518 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clk1P22518 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clk1P22518 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clk1P22518 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clk1P22518 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clk1P22518 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clk1P22518 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.18□□□□□ -0.46
Clk1P22518 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clk1P22518 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clk1P22518 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms