Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.5□□□□□ -0.41
BdnfP21237 Gm12485-201ENSMUST00000119641 291 ntBASIC12.5□□□□□ -0.41
BdnfP21237 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
BdnfP21237 Gm14719-201ENSMUST00000121891 340 ntBASIC12.5□□□□□ -0.41
BdnfP21237 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.5□□□□□ -0.41
BdnfP21237 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.5□□□□□ -0.41
BdnfP21237 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BdnfP21237 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
BdnfP21237 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.5□□□□□ -0.41
BdnfP21237 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.5□□□□□ -0.41
BdnfP21237 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
BdnfP21237 Mir7684-201ENSMUST00000183858 60 ntBASIC12.5□□□□□ -0.41
BdnfP21237 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
BdnfP21237 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.5□□□□□ -0.41
BdnfP21237 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.5□□□□□ -0.41
BdnfP21237 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
BdnfP21237 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.5□□□□□ -0.41
BdnfP21237 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.5□□□□□ -0.41
BdnfP21237 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.5□□□□□ -0.41
BdnfP21237 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
BdnfP21237 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BdnfP21237 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.5□□□□□ -0.41
BdnfP21237 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
BdnfP21237 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
BdnfP21237 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BdnfP21237 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
BdnfP21237 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
BdnfP21237 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BdnfP21237 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
BdnfP21237 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
BdnfP21237 AC122881.1-201ENSMUST00000225757 2695 ntBASIC12.5□□□□□ -0.41
BdnfP21237 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BdnfP21237 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
BdnfP21237 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
BdnfP21237 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BdnfP21237 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
BdnfP21237 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
BdnfP21237 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
BdnfP21237 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.49□□□□□ -0.41
BdnfP21237 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
BdnfP21237 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
BdnfP21237 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
BdnfP21237 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
BdnfP21237 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
BdnfP21237 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.49□□□□□ -0.41
BdnfP21237 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.49□□□□□ -0.41
BdnfP21237 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
BdnfP21237 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
BdnfP21237 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BdnfP21237 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.48□□□□□ -0.41
BdnfP21237 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
BdnfP21237 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.48□□□□□ -0.41
BdnfP21237 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BdnfP21237 Gm15321-201ENSMUST00000121290 288 ntBASIC12.48□□□□□ -0.41
BdnfP21237 Gm15376-201ENSMUST00000122258 783 ntBASIC12.48□□□□□ -0.41
BdnfP21237 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.48□□□□□ -0.41
BdnfP21237 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms