Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.55□□□□□ -0.08
Tpm3P21107 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm3P21107 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm3P21107 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Tpm3P21107 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm3P21107 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm3P21107 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.55□□□□□ -0.08
Tpm3P21107 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Tpm3P21107 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.55□□□□□ -0.08
Tpm3P21107 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.55□□□□□ -0.08
Tpm3P21107 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm3P21107 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Tpm3P21107 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm3P21107 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm3P21107 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm3P21107 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tpm3P21107 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm3P21107 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm3P21107 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.54□□□□□ -0.08
Tpm3P21107 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.54□□□□□ -0.08
Tpm3P21107 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm3P21107 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm3P21107 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm3P21107 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Tpm3P21107 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm3P21107 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Tpm3P21107 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Tpm3P21107 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm3P21107 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Tpm3P21107 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.54□□□□□ -0.08
Tpm3P21107 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Tpm3P21107 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Tpm3P21107 Gm18889-201ENSMUST00000174284 929 ntBASIC14.54□□□□□ -0.08
Tpm3P21107 Gm4804-201ENSMUST00000182234 999 ntBASIC14.54□□□□□ -0.08
Tpm3P21107 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.54□□□□□ -0.08
Tpm3P21107 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm3P21107 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm3P21107 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.54□□□□□ -0.08
Tpm3P21107 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Tpm3P21107 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.54□□□□□ -0.08
Tpm3P21107 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm3P21107 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm3P21107 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm3P21107 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm3P21107 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm3P21107 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm3P21107 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm3P21107 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm3P21107 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm3P21107 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm3P21107 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm3P21107 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.54□□□□□ -0.08
Tpm3P21107 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.54□□□□□ -0.08
Tpm3P21107 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm3P21107 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Tpm3P21107 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm3P21107 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tpm3P21107 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm3P21107 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm3P21107 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm3P21107 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm3P21107 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Tpm3P21107 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Tpm3P21107 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm3P21107 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm3P21107 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm3P21107 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm3P21107 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Tpm3P21107 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm3P21107 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm3P21107 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Tpm3P21107 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm3P21107 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.53□□□□□ -0.08
Tpm3P21107 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm3P21107 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.53□□□□□ -0.08
Tpm3P21107 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.53□□□□□ -0.08
Tpm3P21107 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Tpm3P21107 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm3P21107 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Tpm3P21107 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm3P21107 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm3P21107 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.53□□□□□ -0.08
Tpm3P21107 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm3P21107 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm3P21107 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tpm3P21107 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Tpm3P21107 Gm26684-202ENSMUST00000228229 8257 ntBASIC14.53□□□□□ -0.08
Tpm3P21107 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.53□□□□□ -0.08
Tpm3P21107 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tpm3P21107 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tpm3P21107 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tpm3P21107 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Tpm3P21107 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tpm3P21107 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tpm3P21107 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tpm3P21107 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Tpm3P21107 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tpm3P21107 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tpm3P21107 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tpm3P21107 Gm15460-201ENSMUST00000118147 391 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms