Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
VimP20152 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
VimP20152 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VimP20152 Gm24589-201ENSMUST00000116692 94 ntBASIC13.17□□□□□ -0.3
VimP20152 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.17□□□□□ -0.3
VimP20152 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.17□□□□□ -0.3
VimP20152 Gm44492-201ENSMUST00000197012 141 ntBASIC13.17□□□□□ -0.3
VimP20152 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.17□□□□□ -0.3
VimP20152 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VimP20152 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
VimP20152 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.17□□□□□ -0.3
VimP20152 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.17□□□□□ -0.3
VimP20152 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
VimP20152 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VimP20152 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VimP20152 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VimP20152 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
VimP20152 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.17□□□□□ -0.3
VimP20152 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VimP20152 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VimP20152 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VimP20152 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VimP20152 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VimP20152 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VimP20152 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
VimP20152 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VimP20152 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.17□□□□□ -0.3
VimP20152 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VimP20152 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
VimP20152 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.16□□□□□ -0.3
VimP20152 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
VimP20152 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
VimP20152 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.16□□□□□ -0.3
VimP20152 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.16□□□□□ -0.3
VimP20152 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.16□□□□□ -0.3
VimP20152 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.16□□□□□ -0.3
VimP20152 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
VimP20152 Gm20553-201ENSMUST00000204205 844 ntBASIC13.16□□□□□ -0.3
VimP20152 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.16□□□□□ -0.3
VimP20152 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.16□□□□□ -0.3
VimP20152 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.16□□□□□ -0.3
VimP20152 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.16□□□□□ -0.3
VimP20152 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.16□□□□□ -0.3
VimP20152 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
VimP20152 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VimP20152 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VimP20152 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VimP20152 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
VimP20152 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
VimP20152 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VimP20152 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VimP20152 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
VimP20152 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VimP20152 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VimP20152 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
VimP20152 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
VimP20152 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
VimP20152 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VimP20152 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
VimP20152 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VimP20152 Gm15427-201ENSMUST00000117288 531 ntBASIC13.15□□□□□ -0.3
VimP20152 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.15□□□□□ -0.3
VimP20152 Gm13385-201ENSMUST00000121089 220 ntBASIC13.15□□□□□ -0.3
VimP20152 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.15□□□□□ -0.3
VimP20152 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.15□□□□□ -0.3
VimP20152 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VimP20152 Mir5131-201ENSMUST00000175426 93 ntBASIC13.15□□□□□ -0.3
VimP20152 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.15□□□□□ -0.3
VimP20152 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.15□□□□□ -0.3
VimP20152 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VimP20152 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
VimP20152 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VimP20152 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VimP20152 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VimP20152 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
VimP20152 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms