Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ly6c1P0CW02 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ly6c1P0CW02 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Ly6c1P0CW02 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Ly6c1P0CW02 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ly6c1P0CW02 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ly6c1P0CW02 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ly6c1P0CW02 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ly6c1P0CW02 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ly6c1P0CW02 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ly6c1P0CW02 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Ly6c1P0CW02 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ly6c1P0CW02 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Ly6c1P0CW02 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.96□□□□□ -0.66
Ly6c1P0CW02 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ly6c1P0CW02 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ly6c1P0CW02 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ly6c1P0CW02 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ly6c1P0CW02 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.96□□□□□ -0.66
Ly6c1P0CW02 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.66
Ly6c1P0CW02 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Ly6c1P0CW02 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Ly6c1P0CW02 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Gm14301-201ENSMUST00000120181 324 ntBASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Gm1335-201ENSMUST00000121653 386 ntBASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Gm16479-201ENSMUST00000121706 932 ntBASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Gm7029-201ENSMUST00000173226 450 ntBASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Gm27682-201ENSMUST00000183930 110 ntBASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Gm19212-201ENSMUST00000216642 862 ntBASIC10.95□□□□□ -0.66
Ly6c1P0CW02 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Gm38346-201ENSMUST00000192379 2639 ntBASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Ly6c1P0CW02 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Ly6c1P0CW02 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms